RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CLTBP09497 229 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 PRR23D2P0DMB1 279 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 ZNF182P17025 639 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 GNLYP22749 145 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 ACTN2P35609 894 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 CDH8P55286 799 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 NLRP5P59047 1200 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 PRAMEP78395 509 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 WTAPQ15007 396 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 DCAF6Q58WW2 860 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 TMEM154Q6P9G4 183 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 CHST9Q7L1S5 443 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 SPATA3Q8NHX4 192 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 NSUN4Q96CB9 384 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 FAM120BQ96EK7 910 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 URB1-AS1Q96HZ7 61 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 TMEM68Q96MH6 324 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 SLITRK1Q96PX8 696 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 NUDT16L1Q9BRJ7 211 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 CCDC68Q9H2F9 335 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 KRCC1Q9NPI7 259 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 GPR108Q9NPR9 543 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 NSMCE4AQ9NXX6 385 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 hCG_1807616A0A1W2PRN6 198 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 AGAP14A8MT82 685 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 AHCYL1O43865 530 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 SLC25A12O75746 678 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 NDUFB4O95168 129 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 LCATP04180 440 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 MCM3P25205 808 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 UBA7P41226 1012 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 GARSP41250 739 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 CLCN3P51790 818 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 NAE1Q13564 534 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 SHBQ15464 509 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 ZSCAN23Q3MJ62 389 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 MMEL1Q495T6 779 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 C6orf141Q5SZD1 244 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 OTUD1Q5VV17 481 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 SARM1Q6SZW1 724 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 BRINP3Q76B58 766 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 LINGO2Q7L985 606 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 SZRD1Q7Z422 152 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 RPAP2Q8IXW5 612 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 C17orf53Q8N3J3 647 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 SRBD1Q8N5C6 995 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 SCCPDHQ8NBX0 429 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 OR14L1PQ8NHC6 308 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 TRIB2Q92519 343 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 ARHGEF26Q96DR7 871 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 SLC41A2Q96JW4 573 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 FAM110AQ9BQ89 295 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 PLAC1Q9HBJ0 212 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 ERVK-11Q9UQG0 969 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 MTMR6Q9Y217 621 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 RABGAP1Q9Y3P9 1069 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 INSL5Q9Y5Q6 135 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 TTC3P53804 2025 aa4.79□□□□□ -1.64
SMCHD1-205ENST00000581383 A0A1B0GVT2 93 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 TMEM202A6NGA9 273 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 AKR1B15C9JRZ8 316 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 J3KR12 359 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 TNFRSF13BO14836 293 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 NDUFS3O75489 264 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 OR2C1O95371 312 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 HOXB2P14652 356 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 PORP16435 677 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 NAGAP17050 411 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 GALCP54803 685 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 NANOS2P60321 138 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 ADORA2A-AS1P86434 159 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 ST3GAL1Q11201 340 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 CHAF1BQ13112 559 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 CTTNQ14247 550 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 NEDD9Q14511 834 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 USP41Q3LFD5 358 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 DUSP28Q4G0W2 176 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 ZNF585BQ52M93 769 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 FSCBQ5H9T9 825 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 DNTTIP2Q5QJE6 756 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 FNBP1LQ5T0N5 605 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 ANKRD54Q6NXT1 300 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 GLDNQ6ZMI3 551 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 MTSS1LQ765P7 747 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 WDR63Q8IWG1 891 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 ADGRF2Q8IZF7 708 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 CCDC89Q8N998 374 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 AGBL3Q8NEM8 1001 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 TMEM47Q9BQJ4 181 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 PDZD7Q9H5P4 517 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 SLC28A3Q9HAS3 691 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 CLK4Q9HAZ1 481 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 MKKSQ9NPJ1 570 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 OR6C3Q9NZP0 311 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 RCOR1Q9UKL0 485 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 PCDHGB4Q9UN71 923 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 SESN1Q9Y6P5 492 aa4.78□□□□□ -1.64
SMCHD1-205ENST00000581383 VWA5AO00534 786 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms