RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 PACSIN1Q9BY11 444 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 TMEM168Q9H0V1 697 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 PRORYQ9H606 182 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 SYNDIG1Q9H7V2 258 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 CYP4F12Q9HCS2 524 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 RABGEF1Q9UJ41 708 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 PPIL1Q9Y3C6 166 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 NBEAQ8NFP9 2946 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 NPIPB15A6NHN6 443 aaPredicted RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 PSMD11O00231 422 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 MATN3O15232 486 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 CBFA2T2O43439 604 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 PDHA1P08559 390 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 KRT7P08729 469 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 LHCGRP22888 699 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 CCNCP24863 283 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 RBMS1P29558 406 aaKnown RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 ETV3P41162 512 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 TAS2R40P59535 323 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 GALNT2Q10471 571 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 PTPRRQ15256 657 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 IFI16Q16666 785 aaKnown RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 ASTE1Q2TB18 679 aaPredicted RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 SPECC1LQ69YQ0 1117 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 TIGD7Q6NT04 549 aaPredicted RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 OGFOD3Q6PK18 319 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 HSD11B1LQ7Z5J1 315 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 SPACA3Q8IXA5 215 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 NDUFAF2Q8N183 169 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 PIH1D2Q8WWB5 315 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 MAML1Q92585 1016 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 DTD2Q96FN9 168 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 NAF1Q96HR8 494 aaKnown RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 HIC2Q96JB3 615 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 SLC46A1Q96NT5 459 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 ZNF670Q9BS34 389 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 POLR1EQ9GZS1 481 aaKnown RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 DEF6Q9H4E7 631 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 ASCL3Q9NQ33 180 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 PHPT1Q9NRX4 125 aaPredicted RBP15.88■□□□□ 0.13
CRLF3-203ENST00000578692 THSD1Q9NS62 852 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 LCMT1Q9UIC8 334 aa15.88■□□□□ 0.13
CRLF3-203ENST00000578692 A0A1W2PNU3 283 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 PRSS38A1L453 326 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 FZD6O60353 706 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 MAP3K6O95382 1288 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 MYCLP1P12525 358 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 KRT10P13645 584 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CTPS1P17812 591 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CES1P23141 567 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CCL7P80098 99 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 TRIM14Q14142 442 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 TSR1Q2NL82 804 aaKnown RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 ZFYVE27Q5T4F4 411 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 IGF2-ASQ6U949 168 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 Q6ZVL8 140 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 USP45Q70EL2 814 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 TSPAN33Q86UF1 283 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 HEATR4Q86WZ0 1026 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CCL4L1Q8NHW4 92 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 WDR36Q8NI36 951 aaKnown RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 PRR11Q96HE9 360 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 BBC3Q96PG8 261 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 TSGA13Q96PP4 275 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 MCCC1Q96RQ3 725 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 DNAJC7Q99615 494 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 TEX101Q9BY14 249 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 DPEP2Q9H4A9 486 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 RBM22Q9NW64 420 aaKnown RBP eCLIP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 ZNHIT6Q9NWK9 470 aaKnown RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 PCDHGA8Q9Y5G5 932 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CACNA1GO43497 2377 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 SSU72P8A0A1W2PR75 194 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CEACAM5P06731 702 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 GLB1P16278 677 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 TLE3Q04726 772 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 COL9A2Q14055 689 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 FOXR1Q6PIV2 292 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 TECPR1Q7Z6L1 1165 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 FATE1Q969F0 183 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 FAF2Q96CS3 445 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 FCRL3Q96P31 734 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 GFM1Q96RP9 751 aaKnown RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 LRRN3Q9H3W5 708 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CARS2Q9HA77 564 aaKnown RBP15.87■□□□□ 0.13
CRLF3-203ENST00000578692 HAUS2Q9NVX0 235 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 AMACRQ9UHK6 382 aa15.87■□□□□ 0.13
CRLF3-203ENST00000578692 CCDC187A0A096LP49 1063 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 A0A0U1RQS6 177 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 A0A1W2PQM1 296 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 GOLGA6CA6NDK9 693 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 GOLGA6BA6NDN3 693 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 AKR1B10O60218 316 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 NOBOXO60393 691 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 FUCA1P04066 466 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 RPLP0P05388 317 aaKnown RBP15.86■□□□□ 0.13
CRLF3-203ENST00000578692 TMEM253P0C7T8 217 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 GOLGA6DP0CG33 693 aa15.86■□□□□ 0.13
CRLF3-203ENST00000578692 CCNB1P14635 433 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms