RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	PTS	Q03393	145 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	MGAT5	Q09328	741 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CNTN1	Q12860	1018 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	NAB1	Q13506	487 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CNGA3	Q16281	694 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	KLHL38	Q2WGJ6	581 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	POM121L1P	Q3SYA9	428 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	TTC31	Q49AM3	519 aa	Predicted RBP	11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	PIP5KL1	Q5T9C9	394 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	PDPK2P	Q6A1A2	396 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	ESRP1	Q6NXG1	681 aa	Known RBP	11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CES3	Q6UWW8	571 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116		Q6ZS52	159 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	TRIM67	Q6ZTA4	783 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CROCCP2	Q86T23	111 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	LMNTD2	Q8IXW0	634 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	HDDC3	Q8N4P3	179 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	AADAT	Q8N5Z0	425 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	OR4K2	Q8NGD2	314 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	OR13J1	Q8NGT2	312 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	DTX3L	Q8TDB6	740 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	FBF1	Q8TES7	1133 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CDKL2	Q92772	493 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CERS2	Q96G23	380 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CDKN2AIPNL	Q96HQ2	116 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	MRGPRX1	Q96LB2	322 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZNF778	Q96MU6	729 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CYTH2	Q99418	400 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	OMD	Q99983	421 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	TMEM109	Q9BVC6	243 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CDH19	Q9H159	772 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	KDM4C	Q9H3R0	1056 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	ACSS3	Q9H6R3	686 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	KCTD5	Q9NXV2	234 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	RABGEF1	Q9UJ41	708 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	FZD4	Q9ULV1	537 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	PLAA	Q9Y263	795 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	NCKAP1	Q9Y2A7	1128 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	KCTD3	Q9Y597	815 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	FADS3	Q9Y5Q0	445 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	PRUNE2	Q8WUY3	3088 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	TCRBV21S2A2	A0A5A6	115 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	DCX	O43602	365 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	TSPAN6	O43657	245 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	ACADM	P11310	421 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	GABRG2	P18507	467 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	LHCGR	P22888	699 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	ARCN1	P48444	511 aa	Known RBP	11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	STC1	P52823	247 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	GAS6	Q14393	721 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	PTPRR	Q15256	657 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	AGBL4	Q5VU57	503 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	LRRC66	Q68CR7	880 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	LIPI	Q6XZB0	460 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	CAPN12	Q6ZSI9	719 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	TSPAN33	Q86UF1	283 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	NRSN1	Q8IZ57	195 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	CAMKK1	Q8N5S9	505 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	OR13C4	Q8NGS5	318 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	CALML6	Q8TD86	181 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	SCG3	Q8WXD2	468 aa	Known RBP	11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	HDAC10	Q969S8	669 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	PBXIP1	Q96AQ6	731 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	EID2B	Q96D98	161 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	SMIM14	Q96QK8	99 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	UHRF1	Q96T88	793 aa	Predicted RBP	11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	MFSD1	Q9H3U5	465 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	ITM2C	Q9NQX7	267 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	FBXL12	Q9NXK8	326 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	NSMCE4A	Q9NXX6	385 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	PKD2L2	Q9NZM6	624 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	VPS18	Q9P253	973 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	SLC2A6	Q9UGQ3	507 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	APPL1	Q9UKG1	709 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	NFS1	Q9Y697	457 aa		11.9	□□□□□ -0.5
PRPF8-212	ENST00000575116	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.9	□□□□□ -0.51
PRPF8-212	ENST00000575116	ATG2B	Q96BY7	2078 aa		11.9	□□□□□ -0.51
PRPF8-212	ENST00000575116	MYLK	Q15746	1914 aa		11.9	□□□□□ -0.51
PRPF8-212	ENST00000575116		A0A1W2PP55	124 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	FAM159B	A6NKW6	160 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	RNASEH2A	O75792	299 aa	Known RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	VAPB	O95292	243 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	C1QA	P02745	245 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	IVL	P07476	585 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	ELFN1	P0C7U0	828 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	NDUFV2	P19404	249 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	ARNT	P27540	789 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	SPINT3	P49223	89 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	PRAME	P78395	509 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	CREB5	Q02930	508 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	IFFO1	Q0D2I5	559 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	ILF2	Q12905	390 aa	Known RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	RALGDS	Q12967	914 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	RASA2	Q15283	850 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	UBAP2	Q5T6F2	1119 aa	Known RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	NEK5	Q6P3R8	708 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	NLRP8	Q86W28	1048 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms