RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CER1O95813 267 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 MT-CYBP00156 380 aaPredicted RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 ATP1A1P05023 1023 aaKnown RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 ITGAVP06756 1048 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 CTPS1P17812 591 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 CSRP1P21291 193 aaKnown RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 HNF1BP35680 557 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 RABIFP47224 123 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 WNT3AP56704 352 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 RALGDSQ12967 914 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 GRIK2Q13002 908 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 IHHQ14623 411 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 LRRC14Q15048 493 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 OASLQ15646 514 aaKnown RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 PCSK7Q16549 785 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 QPCTQ16769 361 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 PARP6Q2NL67 630 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 P3H1Q32P28 736 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 C4orf22Q6V702 233 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 KYAT3Q6YP21 454 aaKnown RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 ARHGEF18Q6ZSZ5 1173 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 ABI3BPQ7Z7G0 1075 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 OXR1Q8N573 874 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 FAM71DQ8N9W8 422 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 TP53I13Q8NBR0 393 aaPredicted RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 CCDC110Q8TBZ0 833 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 CCHCR1Q8TD31 782 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 C1orf54Q8WWF1 131 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 ZCCHC14Q8WYQ9 949 aaKnown RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 CENPTQ96BT3 561 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 RTP4Q96DX8 246 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 LYSMD1Q96S90 227 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 KLF6Q99612 283 aaPredicted RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 GTPBP2Q9BX10 602 aaKnown RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 FSD1LQ9BXM9 530 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 UBP1Q9NZI7 540 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 ITPR1Q14643 2758 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 CTAGE9A4FU28 777 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 NPIPB15A6NHN6 443 aaPredicted RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 SRRM3A6NNA2 597 aaPredicted RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 A8MX80 341 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 PGRMC1O00264 195 aaKnown RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 WNT9AO14904 365 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 YKT6O15498 198 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 RECQL5O94762 991 aaPredicted RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 WNT1P04628 370 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 THEGLP0DJG4 465 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 HLA-DPA1P20036 260 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 FDFT1P37268 417 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 CTSKP43235 329 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 NXPH1P58417 271 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 YPEL5P62699 121 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 SNX1Q13596 522 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 PTK2BQ14289 1009 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 ACOX1Q15067 660 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 SIX1Q15475 284 aaPredicted RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 CNGA3Q16281 694 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 KIF19Q2TAC6 998 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 CRTC1Q6UUV9 634 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 KDELC1Q6UW63 502 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 GCNT7Q6ZNI0 430 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 KDELC2Q7Z4H8 507 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 CBARPQ8N350 705 aaPredicted RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 MINDY1Q8N5J2 469 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 ACTRT1Q8TDG2 376 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 ATG4AQ8WYN0 398 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 COL26A1Q96A83 441 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 BMFQ96LC9 184 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 COQ10AQ96MF6 247 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 TRIB3Q96RU7 358 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 WDR24Q96S15 920 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 NAPGQ99747 312 aaPredicted RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 MYOCQ99972 504 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 ERVMER34-1Q9H9K5 563 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 MAGEE1Q9HCI5 957 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 FZD3Q9NPG1 666 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 DNAAF2Q9NVR5 837 aaKnown RBP11.04□□□□□ -0.64
CHD3-216ENST00000573936 COQ6Q9Y2Z9 468 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 SLCO1B1Q9Y6L6 691 aa11.04□□□□□ -0.64
CHD3-216ENST00000573936 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 RGSL1A5PLK6 1076 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 CDX4O14627 284 aaPredicted RBP11.03□□□□□ -0.64
CHD3-216ENST00000573936 RAD51BO15315 384 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 FGF1P05230 155 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 PYGLP06737 847 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 ALPIP09923 528 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 ZNF883P0CG24 379 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 PSMB4P28070 264 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 CLDN2P57739 230 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 BNC1Q01954 994 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 SEMG2Q02383 582 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 PTSQ03393 145 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 SLC14A1Q13336 389 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 MTM1Q13496 603 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 GALNT3Q14435 633 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 SUZ12Q15022 739 aaKnown RBP11.03□□□□□ -0.64
CHD3-216ENST00000573936 IRF4Q15306 451 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 SLC1A5Q15758 541 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms