RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 ARSEP51690 589 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 EPHB1P54762 984 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 DSC2Q02487 901 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 GBE1Q04446 702 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 CCDC173Q0VFZ6 552 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 PAFAH1B3Q15102 231 aaKnown RBP13.66□□□□□ -0.22
PRPF8-202ENST00000571346 PDK2Q15119 407 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 PTPRRQ15256 657 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 ISXQ2M1V0 245 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 TBC1D25Q3MII6 688 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 RAET1GQ6H3X3 334 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 PNCKQ6P2M8 343 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 HSD11B1LQ7Z5J1 315 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 TAF8Q7Z7C8 310 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 TSPAN33Q86UF1 283 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 LRRC49Q8IUZ0 686 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 VSTM4Q8IW00 320 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 TPCN2Q8NHX9 752 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 SNIP1Q8TAD8 396 aaKnown RBP13.66□□□□□ -0.22
PRPF8-202ENST00000571346 FAM71BQ8TC56 605 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 CCDC74AQ96AQ1 378 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 DTD2Q96FN9 168 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 ATXN7L3BQ96GX2 97 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 COQ10AQ96MF6 247 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 RBM15Q96T37 977 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRPF8-202ENST00000571346 LGMNQ99538 433 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 LGR4Q9BXB1 951 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 CYP4F12Q9HCS2 524 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 PHPT1Q9NRX4 125 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-202ENST00000571346 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 SATB2Q9UPW6 733 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 DGKBQ9Y6T7 804 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 SSU72P8A0A1W2PR75 194 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 PRSS38A1L453 326 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 LRRD1A4D1F6 860 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 TCEA3O75764 348 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 KRT1P04264 644 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 HLA-DQB2P05538 268 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 KRT10P13645 584 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 MX2P20592 715 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 PCBP4P57723 403 aaKnown RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 IFI16Q16666 785 aaKnown RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 ASTE1Q2TB18 679 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 LRRC66Q68CR7 880 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 DOK6Q6PKX4 331 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 NDUFAF2Q8N183 169 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 SDR16C5Q8N3Y7 309 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 TEX26Q8N6G2 289 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 CCNYQ8ND76 341 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 FGF11Q92914 225 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 CCDC42Q96M95 316 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 MCCC1Q96RQ3 725 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 TMEM168Q9H0V1 697 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 NHEJ1Q9H9Q4 299 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 CARS2Q9HA77 564 aaKnown RBP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 RBM22Q9NW64 420 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRPF8-202ENST00000571346 CD84Q9UIB8 345 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 ASXL3Q9C0F0 2248 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 RP1P56715 2156 aa13.65□□□□□ -0.22
PRPF8-202ENST00000571346 A0A0U1RQS6 177 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 PDE2AO00408 941 aaPredicted RBP13.64□□□□□ -0.23
PRPF8-202ENST00000571346 MATN3O15232 486 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
PRPF8-202ENST00000571346 PDHA1P08559 390 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 TNNT1P13805 278 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 CA4P22748 312 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 PDX1P52945 283 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 CDK3Q00526 305 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 LVRNQ6Q4G3 990 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 Q6ZVL8 140 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 PQLC3Q8N755 202 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 FAM46DQ8NEK8 389 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 LPCAT1Q8NF37 534 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 SLC35G2Q8TBE7 412 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 RAPGEF5Q92565 580 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 MAML1Q92585 1016 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 FAF2Q96CS3 445 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 CHP1Q99653 195 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 TDRD1Q9BXT4 1180 aaKnown RBP13.64□□□□□ -0.23
PRPF8-202ENST00000571346 POLR1BQ9H9Y6 1135 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 RABGEF1Q9UJ41 708 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 HEY1Q9Y5J3 304 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 ENTPD2Q9Y5L3 495 aa13.64□□□□□ -0.23
PRPF8-202ENST00000571346 D6RAR5 112 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 KCNK1O00180 336 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 PSMD11O00231 422 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 TNFRSF10CO14798 259 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 CCNB1P14635 433 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 CCNCP24863 283 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 TRIM23P36406 574 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 GPR1P46091 355 aa13.63□□□□□ -0.23
PRPF8-202ENST00000571346 GNPDA1P46926 289 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms