RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 HDAC10Q969S8 669 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 TSPAN17Q96FV3 270 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 GPATCH1Q9BRR8 931 aaKnown RBP17.48■□□□□ 0.39
SCARF1-205ENST00000571272 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 SOX17Q9H6I2 414 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-205ENST00000571272 MID1IP1Q9NPA3 183 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 CMTM6Q9NX76 183 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 TTC3P53804 2025 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 CASTOR2A6NHX0 329 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 PIP5K1BO14986 540 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 MTHFD1P11586 935 aaKnown RBP17.48■□□□□ 0.39
SCARF1-205ENST00000571272 HOXD8P13378 290 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-205ENST00000571272 FASP25445 335 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 PSMA4P25789 261 aaKnown RBP17.48■□□□□ 0.39
SCARF1-205ENST00000571272 GJA5P36382 358 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 PGFP49763 221 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 NUP107P57740 925 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 ANKDD1AQ495B1 522 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 ZBED5Q49AG3 693 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 FBXO48Q5FWF7 155 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 CILP2Q8IUL8 1156 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 CLYBLQ8N0X4 340 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 CALML6Q8TD86 181 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 LPPQ93052 612 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 NT5MQ9NPB1 228 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 KCTD3Q9Y597 815 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 CAPN15O75808 1086 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 APLP1P51693 650 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 GALNT1Q10472 559 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 INPP5AQ14642 412 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 KCTD21Q4G0X4 260 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 PTGR2Q8N8N7 351 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 FAM210AQ96ND0 272 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 NSUN5Q96P11 429 aaKnown RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 KLHL5Q96PQ7 755 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 VPS45Q9NRW7 570 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 AGPAT4Q9NRZ5 378 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 MIOSQ9NXC5 875 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 BTRCQ9Y297 605 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 CDK14O94921 469 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 MT-ND1P03886 318 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 TFPTP0C1Z6 253 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 MYF6P23409 242 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 CD86P42081 329 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 SERPINH1P50454 418 aaKnown RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 CHST15Q7LFX5 561 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 C14orf80Q86SX3 495 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 CCDC117Q8IWD4 279 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 MFSD2AQ8NA29 543 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 GFM2Q969S9 779 aaKnown RBP17.47■□□□□ 0.39
SCARF1-205ENST00000571272 ZUFSPQ96AP4 578 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 CATSPERBQ9H7T0 1116 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 PTCH2Q9Y6C5 1203 aa17.47■□□□□ 0.39
SCARF1-205ENST00000571272 FXYD1O00168 92 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 GIPC1O14908 333 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 INPP4BO15327 924 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 ATE1O95260 518 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 LINC00032P0C843 101 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 PMS2P3Q13401 168 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 RPS6KA2Q15349 733 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 PFKFB4Q16877 469 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 GPR107Q5VW38 600 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 ELMSAN1Q6PJG2 1045 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 BBS5Q8N3I7 341 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 DNAJB14Q8TBM8 379 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 TWIST2Q8WVJ9 160 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 TUBGCP3Q96CW5 907 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 TRMOQ9BU70 441 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 CXorf21Q9HAI6 301 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 PLGRKTQ9HBL7 147 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 CDH9Q9ULB4 789 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 NDUFAF1Q9Y375 327 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 V9GYQ6 96 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 ZNF236Q9UL36 1845 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 TANC1Q9C0D5 1861 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 EI24O14681 340 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 IRAK2O43187 625 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 NCK1P16333 377 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 SLC6A2P23975 617 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 SLC5A3P53794 718 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 ATP6V0D1P61421 351 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 HERVK_113P63132 956 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 CYP51A1Q16850 503 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 INTS11Q5TA45 600 aaKnown RBP17.46■□□□□ 0.39
SCARF1-205ENST00000571272 KDELC1Q6UW63 502 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 TRIM74Q86UV6 250 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 TRIM73Q86UV7 250 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 ZBTB46Q86UZ6 589 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 MIER2Q8N344 545 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 HOPXQ9BPY8 73 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-205ENST00000571272 ERVK-6Q9BXR3 956 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 TBC1D13Q9NVG8 400 aa17.46■□□□□ 0.39
SCARF1-205ENST00000571272 UNCXA6NJT0 531 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 AQP12BA6NM10 295 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 UBXN8O00124 270 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 ARPC2O15144 300 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 CLOCKO15516 846 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 S1PR4O95977 384 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 CES1P23141 567 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms