RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SIK3Q9Y2K2 1263 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 PCDHB11Q9Y5F2 797 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 USP9XQ93008 2570 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 RP1L1Q8IWN7 2480 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 RHPN2P1A8MT19 583 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 TMCO5BA8MYB1 307 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 EEF2KO00418 725 aaKnown RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 PPFIA2O75334 1257 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 CPNE6O95741 557 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 FGF1P05230 155 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 CALB1P05937 261 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 CCNB1P14635 433 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 LIFP15018 202 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 EEF1GP26641 437 aaKnown RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 STAT1P42224 750 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SCNN1BP51168 640 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SUOXP51687 545 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 BCL2L1Q07817 233 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SYCP1Q15431 976 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SMYD5Q6GMV2 418 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 PNCKQ6P2M8 343 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 RFLNAQ6ZTI6 216 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 TRIM74Q86UV6 250 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 PIM3Q86V86 326 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 ZSCAN1Q8NBB4 408 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 ART4Q93070 314 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 ECHDC3Q96DC8 303 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 NUS1Q96E22 293 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 TUBGCP5Q96RT8 1024 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SNRNP25Q9BV90 132 aaKnown RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SLC12A9Q9BXP2 914 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 TRIM7Q9C029 511 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 ZMYND15Q9H091 742 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 TAAR2Q9P1P5 351 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 PCSK1NQ9UHG2 260 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 SUFUQ9UMX1 484 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 AP4E1Q9UPM8 1137 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 PCDHGC4Q9Y5F7 938 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 B3GALT1Q9Y5Z6 326 aa12.08□□□□□ -0.48
CAPN3-220ENST00000569827 USP9YO00507 2555 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-220ENST00000569827 TRBV23OR9-2A0A075B6M9 112 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 A0A1W2PQC6 194 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 TRAFD1O14545 582 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-220ENST00000569827 PPM1DO15297 605 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 FGF10O15520 208 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-220ENST00000569827 NUDT21O43809 227 aaKnown RBP12.07□□□□□ -0.48
CAPN3-220ENST00000569827 CEACAM5P06731 702 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 MYCLP1P12525 358 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-220ENST00000569827 CD1CP29017 333 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 ETV3P41162 512 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 PPM1FP49593 454 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-220ENST00000569827 SLC10A7Q0GE19 358 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 BIRC2Q13490 618 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 GRM3Q14832 879 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 IGFBP7Q16270 282 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 PPP6R3Q5H9R7 873 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-220ENST00000569827 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 DCUN1D2Q6PH85 259 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 HSD11B1LQ7Z5J1 315 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 TSPAN33Q86UF1 283 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 NAGSQ8N159 534 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 IL22RA1Q8N6P7 574 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 ARFGAP1Q8N6T3 406 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 KIAA1524Q8TCG1 905 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 HCAR2Q8TDS4 363 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 NKD1Q969G9 470 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 AGPAT1Q99943 283 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 CNPY3Q9BT09 278 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 SLC25A18Q9H1K4 315 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 NUP62CLQ9H1M0 184 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 EPN3Q9H201 632 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 OCIAD1Q9NX40 245 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 DACH1Q9UI36 760 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 CD84Q9UIB8 345 aa12.07□□□□□ -0.48
CAPN3-220ENST00000569827 ANKRD62A6NC57 917 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 A8MU76 341 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 STMND1H3BQB6 276 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 TNFRSF10CO14798 259 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 DUX1O43812 170 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 PRKAR1AP10644 381 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 PNLIPP16233 465 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 CTPS1P17812 591 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 ERCC2P18074 760 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 LHCGRP22888 699 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 KELP23276 732 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 PSMA2P25787 234 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 UGT1A3P35503 534 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 TRIM23P36406 574 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 NDST2P52849 883 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 COPB1P53618 953 aaKnown RBP12.06□□□□□ -0.48
CAPN3-220ENST00000569827 MAXP61244 160 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 CDK3Q00526 305 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 CTBSQ01459 385 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 SNAP47Q5SQN1 464 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms