RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 H0YAE9 185 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 J3QRK9 145 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 LTA4HP09960 611 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 SLC6A2P23975 617 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 ATP1A4Q13733 1029 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 LAMC2Q13753 1193 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 VGLL4Q14135 290 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 CBX2Q14781 532 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 COQ5Q5HYK3 327 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 EGFLAMQ63HQ2 1017 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 KIAA0930Q6ICG6 404 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 KIAA0408Q6ZU52 694 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 FBXL8Q96CD0 374 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 L3HYPDHQ96EM0 354 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 C19orf60Q96EN9 201 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 C3orf30Q96M34 536 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 CYP2S1Q96SQ9 504 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 CHST12Q9NRB3 414 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 INTS10Q9NVR2 710 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 GDAP2Q9NXN4 497 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 EGFL7Q9UHF1 273 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 VWA7Q9Y334 891 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 PCDHA9Q9Y5H5 950 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 PIRO00625 290 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 TPST1O60507 370 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 BCL10O95999 233 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 MBL2P11226 248 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 CAPN3P20807 821 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 MAP4P27816 1152 aaKnown RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 NDUFV1P49821 464 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF135P52742 658 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 POU6F1Q14863 301 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 ACAP2Q15057 778 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 NEDD8Q15843 81 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 EML3Q32P44 896 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 RBM20Q5T481 1227 aaKnown RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 LEMD2Q8NC56 503 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 MPHOSPH6Q99547 160 aaKnown RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 OLFM1Q99784 485 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 SPATC1LQ9H0A9 340 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 ARMC7Q9H6L4 198 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 AKTIPQ9H8T0 292 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 SNTG2Q9NY99 539 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 SLC2A6Q9UGQ3 507 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 GJD2Q9UKL4 321 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 MYLKQ15746 1914 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 NRCAMQ92823 1304 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 HTR3EA5X5Y0 456 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 NR5A2O00482 541 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 CLPXO76031 633 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 UMPSP11172 480 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 HOXD12P35452 270 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 RXRGP48443 463 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 Q3C1V9 767 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 NOL9Q5SY16 702 aaKnown RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 CLEC6AQ6EIG7 209 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 PTRH1Q86Y79 214 aaKnown RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 TBC1D21Q8IYX1 336 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 PGAP3Q96FM1 320 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 UBXN10Q96LJ8 280 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 FCRL5Q96RD9 977 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 ZFYVE28Q9HCC9 887 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 TRNAU1APQ9NX07 287 aaKnown RBP15.7■□□□□ 0.1
COMMD4-215ENST00000566843 PSME2Q9UL46 239 aa15.7■□□□□ 0.1
COMMD4-215ENST00000566843 SPTLC1O15269 473 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 MATN4O95460 622 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ADRA1AP35348 466 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 SNX17Q15036 470 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 FBXO47Q5MNV8 452 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF678Q5SXM1 525 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF618Q5T7W0 954 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF470Q6ECI4 717 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ALKAL1Q6UXT8 129 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 SPATA22Q8NHS9 363 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 RAB2BQ8WUD1 216 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 SNX19Q92543 992 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 LRRC58Q96CX6 371 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 IL1RL2Q9HB29 575 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 SLC52A3Q9NQ40 469 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 TMED5Q9Y3A6 229 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 NUP205Q92621 2012 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ATP6AP2A0A1C7CYW4 349 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 H0Y858 1186 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ATP6AP2O75787 350 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 BEST1O76090 585 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 WISP3O95389 354 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-215ENST00000566843 NPR3P17342 541 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 PAMP19021 973 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 AXLP30530 894 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 CLCN5P51795 746 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 PLK1P53350 603 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 VPS26BQ4G0F5 336 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 UNC50Q53HI1 259 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 GTF2IRD2BQ6EKJ0 949 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 GALNT18Q6P9A2 607 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 GTF2IRD2Q86UP8 949 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 IGFN1Q86VF2 1251 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 PHYKPLQ8IUZ5 450 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 CLYBLQ8N0X4 340 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 MIER2Q8N344 545 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms