RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SLC11A1P49279 550 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 GATMP50440 423 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 PDAP1Q13442 181 aaKnown RBP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 LAMB3Q13751 1172 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 APOFQ13790 326 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 IKBKEQ14164 716 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 MAP7Q14244 749 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SAMD4BQ5PRF9 694 aaKnown RBP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 HECTD2Q5U5R9 776 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 MSANTD2Q6P1R3 559 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SCD5Q86SK9 330 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 LRRC43Q8N309 656 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SCAMP5Q8TAC9 235 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 TADA1Q96BN2 335 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 ROPN1LQ96C74 230 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 GSTO2Q9H4Y5 243 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SUDS3Q9H7L9 328 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 NDFIP2Q9NV92 336 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 VWA7Q9Y334 891 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 AP4S1Q9Y587 144 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 HS3ST4Q9Y661 456 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 NEMP2A6NFY4 417 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 BBIP1A8MTZ0 92 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 GPC4O75487 556 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 RNASEH2AO75792 299 aaKnown RBP16.79■□□□□ 0.28
CMTM3-213ENST00000566756 GALTP07902 379 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 RHOQP17081 205 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 SLC7A1P30825 629 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 FAM171A1Q5VUB5 890 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 TEX26Q8N6G2 289 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 OR13J1Q8NGT2 312 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 SGF29Q96ES7 293 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 ZNF597Q96LX8 424 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 GPR62Q9BZJ7 368 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 TMEM181Q9P2C4 612 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 TLR6Q9Y2C9 796 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 TRAF6Q9Y4K3 522 aa16.79■□□□□ 0.28
CMTM3-213ENST00000566756 TBKBP1A7MCY6 615 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 E7ENX8 843 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 FBP2O00757 339 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 AURKAO14965 403 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 KCNA5P22460 613 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 MAGEA11P43364 429 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 TXNL4AP83876 142 aaKnown RBP16.78■□□□□ 0.28
CMTM3-213ENST00000566756 MYBPC1Q00872 1141 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 MGAT5BQ3V5L5 792 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 SLC39A12Q504Y0 691 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 ZNF280DQ6N043 979 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 FUT10Q6P4F1 479 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 LARP4Q71RC2 724 aaKnown RBP eCLIP16.78■□□□□ 0.28
CMTM3-213ENST00000566756 DEFB128Q7Z7B8 93 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 RNF148Q8N7C7 305 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
CMTM3-213ENST00000566756 SLC39A13Q96H72 371 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 C8orf48Q96LL4 319 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 EFHD1Q9BUP0 239 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 OSBPL11Q9BXB4 747 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 NOL6Q9H6R4 1146 aaKnown RBP16.78■□□□□ 0.28
CMTM3-213ENST00000566756 POPDC3Q9HBV1 291 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-213ENST00000566756 TMEM39AQ9NV64 488 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 TMEM248Q9NWD8 314 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 SFMBT1Q9UHJ3 866 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 PLXNA3P51805 1871 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 NRP2O60462 931 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 CLTBP09497 229 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-213ENST00000566756 GRIK1P39086 918 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 USP46P62068 366 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 ACVR1Q04771 509 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 SMARCB1Q12824 385 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 BTG3Q14201 252 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-213ENST00000566756 CTXN3Q4LDR2 81 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 AGKQ53H12 422 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 ZNF678Q5SXM1 525 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 IL23RQ5VWK5 629 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 EP400NLQ6ZTU2 488 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 ZNF683Q8IZ20 524 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 VWCEQ96DN2 955 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 CYP2S1Q96SQ9 504 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 NDNQ99608 321 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 CROTQ9UKG9 612 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 ATP11BQ9Y2G3 1177 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 MYO16Q9Y6X6 1858 aa16.78■□□□□ 0.28
CMTM3-213ENST00000566756 MIA3Q5JRA6 1907 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 PDLIM1O00151 329 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 MSI1O43347 362 aaKnown RBP16.77■□□□□ 0.28
CMTM3-213ENST00000566756 TBC1D4O60343 1298 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 FGF4P08620 206 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 OR4Q2P0C623 313 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
CMTM3-213ENST00000566756 SLC5A9Q2M3M2 681 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 SPATS1Q496A3 300 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 ZNF789Q5FWF6 425 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 ACBD5Q5T8D3 534 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-213ENST00000566756 MARC1Q5VT66 337 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 C14orf80Q86SX3 495 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 GOLM1Q8NBJ4 401 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms