RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 RBM17Q96I25 401 aaKnown RBP2.19□□□□□ -2.06
SMG1-212ENST00000566328 RPS10P5Q9NQ39 176 aa2.19□□□□□ -2.06
SMG1-212ENST00000566328 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.19□□□□□ -2.06
SMG1-212ENST00000566328 TINAGQ9UJW2 476 aa2.19□□□□□ -2.06
SMG1-212ENST00000566328 CDC23Q9UJX2 597 aa2.19□□□□□ -2.06
SMG1-212ENST00000566328 C2CD2Q9Y426 696 aa2.19□□□□□ -2.06
SMG1-212ENST00000566328 COL5A2P05997 1499 aaPredicted RBP2.19□□□□□ -2.06
SMG1-212ENST00000566328 C17orf113A0A1B0GUU1 675 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 HMX3A6NHT5 357 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 HSPB2A8KAH6 182 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 KRT38O76015 456 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 IGHV4-39P01824 125 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 SLC2A4P14672 509 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 DPEP1P16444 411 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 GNB3P16520 340 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 ZNF26P17031 533 aaPredicted RBP2.18□□□□□ -2.06
SMG1-212ENST00000566328 HOXA13P31271 388 aaPredicted RBP2.18□□□□□ -2.06
SMG1-212ENST00000566328 DCTP40126 519 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 MRPS5P82675 430 aaKnown RBP2.18□□□□□ -2.06
SMG1-212ENST00000566328 HSPB2Q16082 182 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 ZFP69Q49AA0 526 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 CBWD5Q5RIA9 395 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 DENND1BQ6P3S1 775 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 ASB18Q6ZVZ8 466 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 TRIM58Q8NG06 486 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 CEP70Q8NHQ1 597 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 DUSP19Q8WTR2 217 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 RNFT2Q96EX2 444 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 POM121L2Q96KW2 1035 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 HAUS8Q9BT25 410 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 CDK19Q9BWU1 502 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 SLC52A3Q9NQ40 469 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 BABAM1Q9NWV8 329 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 DLGAP4Q9Y2H0 992 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 TAF1P21675 1872 aa2.18□□□□□ -2.06
SMG1-212ENST00000566328 CBY3A6NI87 242 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 H7C423 109 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 TCERG1O14776 1098 aaKnown RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 DCXO43602 365 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 SYNGR3O43761 229 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 PRKNO60260 465 aaPredicted RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 MYOD1P15172 320 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 CD72P21854 359 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 HOXC8P31273 242 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 HNRNPH2P55795 449 aaKnown RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 ZNF234Q14588 700 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 UGP2Q16851 508 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 MMEL1Q495T6 779 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 STXBP5Q5T5C0 1151 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 SULT6B1Q6IMI4 303 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 TTI2Q6NXR4 508 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 ZNF790Q6PG37 636 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 KCTD18Q6PI47 426 aaPredicted RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 KSR2Q6VAB6 950 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 TMTC1Q8IUR5 882 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 ZNF34Q8IZ26 560 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 ATG16L2Q8NAA4 619 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 LINS1Q8NG48 757 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 FBXL8Q96CD0 374 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 ZNF414Q96IQ9 312 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 SH3GL2Q99962 352 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 RBM4BQ9BQ04 359 aaKnown RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 NEURL2Q9BR09 285 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 MXRA8Q9BRK3 442 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 MCRIP2Q9BUT9 160 aaKnown RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 TFB2MQ9H5Q4 396 aaKnown RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 TLR8Q9NR97 1041 aaKnown RBP2.17□□□□□ -2.06
SMG1-212ENST00000566328 C2orf42Q9NWW7 574 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 DACT1Q9NYF0 836 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 CARD8Q9Y2G2 431 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 LRCH1Q9Y2L9 728 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 LOXL2Q9Y4K0 774 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 ABCC9O60706 1549 aa2.17□□□□□ -2.06
SMG1-212ENST00000566328 A0A087WV62 115 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 CEP104O60308 925 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 SORBS2O94875 1100 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 MMP2P08253 660 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 ERVK-10P10266 1014 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 ETFAP13804 333 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 CST5P28325 142 aaPredicted RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 CORO1AP31146 461 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 PUM3Q15397 648 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 TMEM35AQ53FP2 167 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 WDR38Q5JTN6 314 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 TANGO2Q6ICL3 276 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 LIN54Q6MZP7 749 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 MTSS1LQ765P7 747 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 TRPT1Q86TN4 253 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 FOXRED2Q8IWF2 684 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 KIAA2013Q8IYS2 634 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 AMER3Q8N944 861 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 BEST2Q8NFU1 509 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 ZNF473Q8WTR7 871 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 CNOT9Q92600 299 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 SDCCAG3Q96C92 435 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 MTERF1Q99551 399 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 FGF22Q9HCT0 170 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 SAYSD1Q9NPB0 183 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 INTS10Q9NVR2 710 aaKnown RBP2.16□□□□□ -2.06
SMG1-212ENST00000566328 FAM120CQ9NX05 1096 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms