RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GH2P01242 217 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 PFKFB1P16118 471 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 CASQ1P31415 396 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 NT5C2P49902 561 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 PAPOLAP51003 745 aaKnown RBP4.4□□□□□ -1.71
LINC00561-201ENST00000565815 TBX2Q13207 712 aaPredicted RBP4.4□□□□□ -1.71
LINC00561-201ENST00000565815 TRIM29Q14134 588 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 ALX1Q15699 326 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 AARS2Q5JTZ9 985 aaKnown RBP4.4□□□□□ -1.71
LINC00561-201ENST00000565815 CCDC70Q6NSX1 233 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 DHRS13Q6UX07 377 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 SYT10Q6XYQ8 523 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 TRIM72Q6ZMU5 477 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 ZNF66Q6ZN08 573 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 MDGA2Q7Z553 956 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 MB21D2Q8IYB1 491 aaPredicted RBP4.4□□□□□ -1.71
LINC00561-201ENST00000565815 NEK9Q8TD19 979 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 SEC62Q99442 399 aaKnown RBP4.4□□□□□ -1.71
LINC00561-201ENST00000565815 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.4□□□□□ -1.71
LINC00561-201ENST00000565815 COL4A6Q14031 1691 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 FLT1P17948 1338 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 CXorf65A6NEN9 183 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 FZD7O75084 574 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 RPS6KA5O75582 802 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 SERPINC1P01008 464 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ASGR1P07306 291 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 CYP2A6P11509 494 aaPredicted RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 FDPSP14324 419 aaKnown RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ARSAP15289 507 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ZNF84P51523 738 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 EFNA5P52803 228 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 MPP1Q00013 466 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 TAP1Q03518 808 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ACVR2BQ13705 512 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 LARS2Q15031 903 aaKnown RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 DPCR1Q3MIW9 517 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 TRIM65Q6PJ69 517 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 RSRC2Q7L4I2 434 aaKnown RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 SFTPA1Q8IWL2 248 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 SLC16A11Q8NCK7 471 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 CAGE1Q8TC20 777 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 DDB2Q92466 427 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 RSC1A1Q92681 617 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 PABPC5Q96DU9 382 aaKnown RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 FCRL5Q96RD9 977 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 CINPQ9BW66 212 aaPredicted RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 TRIM31Q9BZY9 425 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 UBN1Q9NPG3 1134 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 TRMT1Q9NXH9 659 aaKnown RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 TLK1Q9UKI8 766 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 BAG5Q9UL15 447 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ITIH6Q6UXX5 1313 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 B4DLN1 442 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 RAMP2O60895 175 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 PGK1P00558 417 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ACVRL1P37023 503 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 MRPL12P52815 198 aaKnown RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 DGKQP52824 942 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 DMWDQ09019 674 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ITGA7Q13683 1181 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ERCC6LQ2NKX8 1250 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 CTXN3Q4LDR2 81 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 RILPL1Q5EBL4 403 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ZNF667Q5HYK9 610 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 SPECC1LQ69YQ0 1117 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 SLC30A9Q6PML9 568 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 WDR53Q7Z5U6 358 aaPredicted RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 RAB11FIP4Q86YS3 637 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 TMTC2Q8N394 836 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 PLD5Q8N7P1 536 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 GOLGA5Q8TBA6 731 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 MRPL38Q96DV4 380 aaKnown RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 TCEANC2Q96MN5 208 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 RAD9AQ99638 391 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 BAG1Q99933 345 aaPredicted RBP4.39□□□□□ -1.71
LINC00561-201ENST00000565815 SLC25A18Q9H1K4 315 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 PCED1AQ9H1Q7 454 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 VCPKMTQ9H867 229 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 PCDHB16Q9NRJ7 776 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 THAP1Q9NVV9 213 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ZNF446Q9NWS9 450 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 ARL15Q9NXU5 204 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 KLQ9UEF7 1012 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 PPP2R2CQ9Y2T4 447 aa4.39□□□□□ -1.71
LINC00561-201ENST00000565815 KLF18A0A0U1RQI7 1052 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 CCDC196A0A1B0GTZ2 297 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 A0A1B0GVL5 298 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 ZBED4O75132 1171 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 ALDOAP04075 364 aaKnown RBP4.38□□□□□ -1.71
LINC00561-201ENST00000565815 RB1P06400 928 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 CCDC175P0C221 793 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 MYCLP12524 364 aaPredicted RBP4.38□□□□□ -1.71
LINC00561-201ENST00000565815 SPAG1Q07617 926 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 WHAMMP3Q1A5X7 153 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 KRBA2Q6ZNG9 492 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 TMEM217Q8N7C4 229 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 MSANTD4Q8NCY6 345 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 FAM110DQ8TAY7 271 aaPredicted RBP4.38□□□□□ -1.71
LINC00561-201ENST00000565815 AFAP1L1Q8TED9 768 aa4.38□□□□□ -1.71
LINC00561-201ENST00000565815 ST8SIA4Q92187 359 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms