RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 DPH1Q9BZG8 443 aa19■□□□□ 0.63
SPSB3-207ENST00000565550 ATP13A3Q9H7F0 1226 aa19■□□□□ 0.63
SPSB3-207ENST00000565550 KLQ9UEF7 1012 aa19■□□□□ 0.63
SPSB3-207ENST00000565550 RP1P56715 2156 aa19■□□□□ 0.63
SPSB3-207ENST00000565550 GOLGA6L6A8MZA4 724 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 NTN3O00634 580 aaPredicted RBP18.99■□□□□ 0.63
SPSB3-207ENST00000565550 SERPINA4P29622 427 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 MARCKSL1P49006 195 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 PDX1P52945 283 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 HADHBP55084 474 aaKnown RBP18.99■□□□□ 0.63
SPSB3-207ENST00000565550 MTM1Q13496 603 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 KCTD16Q68DU8 428 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 KIAA1328Q86T90 577 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 GKN2Q86XP6 184 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 SDR16C5Q8N3Y7 309 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 KCTD6Q8NC69 237 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 ATL2Q8NHH9 583 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 WDR36Q8NI36 951 aaKnown RBP18.99■□□□□ 0.63
SPSB3-207ENST00000565550 CCDC74AQ96AQ1 378 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 WDR92Q96MX6 357 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 CINPQ9BW66 212 aaPredicted RBP18.99■□□□□ 0.63
SPSB3-207ENST00000565550 SP110Q9HB58 689 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 RABGEF1Q9UJ41 708 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 GPR34Q9UPC5 381 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 ALG6Q9Y672 507 aa18.99■□□□□ 0.63
SPSB3-207ENST00000565550 A0A0A6YYK5 440 aaPredicted RBP18.98■□□□□ 0.63
SPSB3-207ENST00000565550 CFAP69A5D8W1 941 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 C3orf70A6NLC5 250 aaPredicted RBP18.98■□□□□ 0.63
SPSB3-207ENST00000565550 SPOPO43791 374 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 MFSD11O43934 449 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 RECQL5O94762 991 aaPredicted RBP18.98■□□□□ 0.63
SPSB3-207ENST00000565550 TNFSF15O95150 251 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 TNFP01375 233 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 KRT1P04264 644 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 KRT7P08729 469 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 KDELR1P24390 212 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 GSDMDP57764 484 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 SKOR1P84550 965 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 BCL2L1Q07817 233 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 NSUN2Q08J23 767 aaKnown RBP eCLIP18.98■□□□□ 0.63
SPSB3-207ENST00000565550 RALGDSQ12967 914 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 LLGL1Q15334 1064 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 ANKRD20A8PQ5CZ79 823 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 FAM182AQ5T1J6 154 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 NCBP2-AS2Q69YL0 99 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 TMCO3Q6UWJ1 677 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 ARL14Q8N4G2 192 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 PQLC3Q8N755 202 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 PAF1Q8N7H5 531 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 ECHDC3Q96DC8 303 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 LCMT1Q9UIC8 334 aa18.98■□□□□ 0.63
SPSB3-207ENST00000565550 COL27A1Q8IZC6 1860 aaPredicted RBP18.98■□□□□ 0.63
SPSB3-207ENST00000565550 CCDC187A0A096LP49 1063 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 LRRD1A4D1F6 860 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 CDRT15L2A8MXV6 281 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 ERVH48-1M5A8F1 160 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 PJA2O43164 708 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 IPO7O95373 1038 aaKnown RBP18.97■□□□□ 0.63
SPSB3-207ENST00000565550 ZNF135P52742 658 aaPredicted RBP18.97■□□□□ 0.63
SPSB3-207ENST00000565550 CCL7P80098 99 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 IL10RBQ08334 325 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 LIPIQ6XZB0 460 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 ZNF843Q8N446 348 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 OR1E3Q8WZA6 343 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 FUBP1Q96AE4 644 aaKnown RBP18.97■□□□□ 0.63
SPSB3-207ENST00000565550 RNF25Q96BH1 459 aaPredicted RBP18.97■□□□□ 0.63
SPSB3-207ENST00000565550 PDXPQ96GD0 296 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 NSMCE3Q96MG7 304 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 RBM15Q96T37 977 aaKnown RBP eCLIP18.97■□□□□ 0.63
SPSB3-207ENST00000565550 LUC7LQ9NQ29 371 aaKnown RBP18.97■□□□□ 0.63
SPSB3-207ENST00000565550 DGKBQ9Y6T7 804 aa18.97■□□□□ 0.63
SPSB3-207ENST00000565550 LRRK1Q38SD2 2015 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 MACROD2A1Z1Q3 448 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 TMEM202A6NGA9 273 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 A8MX80 341 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 TRAFD1O14545 582 aaPredicted RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 SCNN1BP51168 640 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 NAP1L1P55209 391 aaKnown RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 POLR2LP62875 67 aaKnown RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 CCZ1BP86790 482 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 CCZ1P86791 482 aaPredicted RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 RHDQ02161 417 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 RFTN1Q14699 578 aaPredicted RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 PDK2Q15119 407 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 TAF1BQ53T94 588 aaPredicted RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 B3GNT8Q7Z7M8 397 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 LRRC8AQ8IWT6 810 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 OR56A4Q8NGH8 313 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 KRT35Q92764 455 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 FAF2Q96CS3 445 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 CCDC97Q96F63 343 aaPredicted RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 GFM1Q96RP9 751 aaKnown RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 ZNF670Q9BS34 389 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 MRPL40Q9NQ50 206 aaKnown RBP18.96■□□□□ 0.63
SPSB3-207ENST00000565550 SSUH2Q9Y2M2 353 aa18.96■□□□□ 0.63
SPSB3-207ENST00000565550 A0A1W2PQM1 296 aa18.95■□□□□ 0.62
SPSB3-207ENST00000565550 TTC24A2A3L6 582 aaPredicted RBP18.95■□□□□ 0.62
SPSB3-207ENST00000565550 GRID2IPA4D2P6 1211 aa18.95■□□□□ 0.62
SPSB3-207ENST00000565550 CACNB4O00305 520 aaPredicted RBP18.95■□□□□ 0.62
SPSB3-207ENST00000565550 RPLP0P05388 317 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms