RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RMI1Q9H9A7 625 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MEAF6Q9HAF1 191 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PKD2L2Q9NZM6 624 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PDE4DIPQ5VU43 2346 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MAGEB16A2A368 324 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NPHS1O60500 1241 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FYNP06241 537 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SH3BP2P78314 561 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PTPRCAPQ14761 206 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NEPROQ6NW34 567 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RAVER1Q8IY67 606 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ADGRG5Q8IZF4 528 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZC3H15Q8WU90 426 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SEPT8Q92599 483 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CENPNQ96H22 339 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TEX37Q96LM6 180 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HBEGFQ99075 208 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TBL1YQ9BQ87 522 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 C9orf16Q9BUW7 83 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 C1orf50Q9BV19 199 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 LHPPQ9H008 270 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 GID8Q9NWU2 228 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SMPD3Q9NY59 655 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SIP14410 1827 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NCF1BA6NI72 391 aaPredicted RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NCF1CA8MVU1 366 aaPredicted RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 FAM155AB1AL88 458 aaPredicted RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GAS2O43903 313 aaKnown RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 RECQL4O94761 1208 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GSTT2P0CG29 244 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GSTT2BP0CG30 244 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NCF1P14598 390 aaPredicted RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TPD52P55327 224 aaPredicted RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PDZD4Q76G19 769 aaPredicted RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CATSPER4Q7RTX7 472 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HS3ST5Q8IZT8 346 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ARL10Q8N8L6 244 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 APPL2Q8NEU8 664 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HPS1Q92902 700 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 EML4Q9HC35 981 aaKnown RBP20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TXNRD2Q9NNW7 524 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NDUFAF1Q9Y375 327 aa20.52■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TGFB3P10600 412 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HGFP14210 728 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SLC6A2P23975 617 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SHMT2P34897 504 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 OPRL1P41146 370 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CCT8P50990 548 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PCID2Q5JVF3 399 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ZNF362Q5T0B9 420 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 C6orf183Q5T699 404 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PRR23BQ6ZRT6 265 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AFAP1L2Q8N4X5 818 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TRPC4APQ8TEL6 797 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 UHRF1Q96T88 793 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TSR3Q9UJK0 312 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TCAF1Q9Y4C2 921 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DNAJC15Q9Y5T4 150 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CSADQ9Y600 493 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HTR3EA5X5Y0 456 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AXIN1O15169 862 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DCKP27707 260 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 IDUAP35475 653 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ARL1P40616 181 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 IREB2P48200 963 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NFYCQ13952 458 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PFKFB4Q16877 469 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TECRLQ5HYJ1 363 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LARP4Q71RC2 724 aaKnown RBP eCLIP20.51■□□□□ 0.872e-6■■■□□ 16
MAP1LC3B-206ENST00000564844 PLPPR4Q7Z2D5 763 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CLEC4FQ8N1N0 589 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 BEST2Q8NFU1 509 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 OSMRQ99650 979 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KIFC1Q9BW19 673 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NDFIP2Q9NV92 336 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ERAP1Q9NZ08 941 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AASSQ9UDR5 926 aa20.51■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SOCS7O14512 581 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PARNO95453 639 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CYP2C8P10632 490 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GPX3P22352 226 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CAPGP40121 348 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 POLD3Q15054 466 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 STK32CQ86UX6 486 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 B3GALNT2Q8NCR0 500 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CORO1BQ9BR76 489 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 WDCPQ9H6R7 721 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ARMC1Q9NVT9 282 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KRBA1A5PL33 1030 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NOBOXO60393 691 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 INHBBP09529 407 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ARCN1P48444 511 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PRKAA2P54646 552 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SOX4Q06945 474 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TMEM207Q6UWW9 146 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PPHLN1Q8NEY8 458 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GSTO2Q9H4Y5 243 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DYNC1LI2O43237 492 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ALBP02768 609 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms