RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 C1orf50Q9BV19 199 aa11.84□□□□□ -0.51
ABCA3-203ENST00000563623 CCDC90BQ9GZT6 254 aa11.84□□□□□ -0.51
ABCA3-203ENST00000563623 CNGB3Q9NQW8 809 aa11.84□□□□□ -0.51
ABCA3-203ENST00000563623 KCTD3Q9Y597 815 aa11.84□□□□□ -0.51
ABCA3-203ENST00000563623 DDNO94850 711 aaPredicted RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ALBP02768 609 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 MYL3P08590 195 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 PTPRCAPQ14761 206 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 KIAA0319Q5VV43 1072 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 SCAMP5Q8TAC9 235 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 HMGCLL1Q8TB92 370 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM40Q8WWA1 233 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 NAA50Q9GZZ1 169 aaKnown RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 IGSF5Q9NSI5 407 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TBC1D13Q9NVG8 400 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 GDAP2Q9NXN4 497 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TARM1B6A8C7 271 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 UBXN8O00124 270 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 KCNK10P57789 538 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ZBED5Q49AG3 693 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 OGFOD2Q6N063 350 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TAPT1Q6NXT6 567 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 BORAQ6PGQ7 559 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 PAF1Q8N7H5 531 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 HM13Q8TCT9 377 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ESAMQ96AP7 390 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 FCRL2Q96LA5 508 aaPredicted RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 NSUN5Q96P11 429 aaKnown RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 CCDC68Q9H2F9 335 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 SP110Q9HB58 689 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 NDFIP2Q9NV92 336 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ZNF638Q14966 1978 aaKnown RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TCRBV3S1A0A5B6 114 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 BTBD19C9JJ37 291 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TRIM24O15164 1050 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 PAGE1O75459 146 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 GMNNO75496 209 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ZBTB11O95625 1053 aaPredicted RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 HMBSP08397 361 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 OCM2P0CE71 109 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 OCMP0CE72 109 aaPredicted RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 SMIM10L2AP0DMW4 78 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 SMIM10L2BP0DMW5 78 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ARNTP27540 789 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 EEF1DP29692 281 aaKnown RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 OXTRP30559 389 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 SERPINH1P50454 418 aaKnown RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 IL1RL1Q01638 556 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 PPP4R4Q6NUP7 873 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 DCLRE1AQ6PJP8 1040 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 KCTD8Q6ZWB6 473 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 CLYBLQ8N0X4 340 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TWIST2Q8WVJ9 160 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 CATSPERBQ9H7T0 1116 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 SARS2Q9NP81 518 aaKnown RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM30AQ9NV96 361 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 GTF2IRD1Q9UHL9 959 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 CNOT11Q9UKZ1 510 aaKnown RBP11.83□□□□□ -0.52
ABCA3-203ENST00000563623 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 RAD54BQ9Y620 910 aa11.83□□□□□ -0.52
ABCA3-203ENST00000563623 ATE1O95260 518 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 LDLRP01130 860 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 SMPD1P17405 629 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 WARSP23381 471 aaKnown RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ALDH3B2P48448 385 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 KCNC1P48547 511 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 CLCN5P51795 746 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 EMP3P54852 163 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 PMS2P3Q13401 168 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 BFSP2Q13515 415 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 SNX17Q15036 470 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 PSMD5Q16401 504 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 FGD3Q5JSP0 725 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 C6orf10Q5SRN2 563 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM53Q6P2H8 277 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ABRAXAS1Q6UWZ7 409 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 RALGPS2Q86X27 583 aaPredicted RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 PELI3Q8N2H9 469 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 TOP6BLQ8N6T0 577 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 C2CD4AQ8NCU7 369 aaPredicted RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 BPIFB6Q8NFQ5 453 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 NT5C3BQ969T7 300 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM74Q96NL1 305 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 MEAF6Q9HAF1 191 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 VPS45Q9NRW7 570 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 DUS2Q9NX74 493 aaKnown RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ITM2BQ9Y287 266 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 DOCK1Q14185 1865 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 DNAJC25-GNG10A0A024R161 153 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 RRN3P2A6NIE6 340 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 AZIN1O14977 448 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ARPC2O15144 300 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 HOXD12P35452 270 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 TUFMP49411 452 aaKnown RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 RBBP7Q16576 425 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 AARS2Q5JTZ9 985 aaKnown RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM214Q6NUQ4 689 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms