RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ELFN1P0C7U0 828 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 PYGMP11217 842 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 CYP2A6P11509 494 aaPredicted RBP16.61■□□□□ 0.25
CDT1-202ENST00000562747 PFN3P60673 137 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 XRCC4Q13426 336 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 TEX44Q53QW1 395 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 CCDC181Q5TID7 509 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 LIPIQ6XZB0 460 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 USP45Q70EL2 814 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 EID2Q8N6I1 236 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 PIH1D2Q8WWB5 315 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 HAUS1Q96CS2 278 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 NXPE2Q96DL1 559 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 IFT43Q96FT9 208 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 SCRN2Q96FV2 425 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 HES6Q96HZ4 224 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 TDRD1Q9BXT4 1180 aaKnown RBP16.61■□□□□ 0.25
CDT1-202ENST00000562747 SEPT10Q9P0V9 454 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 COQ6Q9Y2Z9 468 aa16.61■□□□□ 0.25
CDT1-202ENST00000562747 HELZ2Q9BYK8 2649 aaKnown RBP16.61■□□□□ 0.25
CDT1-202ENST00000562747 LRRK1Q38SD2 2015 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 DDX3YO15523 660 aaKnown RBP16.6■□□□□ 0.25
CDT1-202ENST00000562747 C1QL1O75973 258 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 TJP3O95049 919 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 ITGAVP06756 1048 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 MMP2P08253 660 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 PDHA1P08559 390 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 PTPN3P26045 913 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 VIPR1P32241 457 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 IGFALSP35858 605 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 RPL26P61254 145 aaKnown RBP16.6■□□□□ 0.25
CDT1-202ENST00000562747 SEMG2Q02383 582 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 BNIP3Q12983 259 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 IHHQ14623 411 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 LRRC14Q15048 493 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 NOMO1Q15155 1222 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 SLC14A2Q15849 920 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 HES3Q5TGS1 186 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 KANSL1Q7Z3B3 1105 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 ZC3H18Q86VM9 953 aaKnown RBP16.6■□□□□ 0.25
CDT1-202ENST00000562747 SLC22A18ASQ8N1D0 253 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDT1-202ENST00000562747 AGAP3Q96P47 875 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 QKIQ96PU8 341 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDT1-202ENST00000562747 MCCC1Q96RQ3 725 aaPredicted RBP16.6■□□□□ 0.25
CDT1-202ENST00000562747 VAT1Q99536 393 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 CEP41Q9BYV8 373 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 SLC25A51Q9H1U9 297 aa16.6■□□□□ 0.25
CDT1-202ENST00000562747 PACSIN2Q9UNF0 486 aaPredicted RBP16.6■□□□□ 0.25
CDT1-202ENST00000562747 RPL26L1Q9UNX3 145 aaKnown RBP16.6■□□□□ 0.25
CDT1-202ENST00000562747 A0A0J9YYE9 177 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 PSMD11O00231 422 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 HEXIM1O94992 359 aaKnown RBP16.59■□□□□ 0.25
CDT1-202ENST00000562747 TRBC1P01850 177 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 JUPP14923 745 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 HNF1BP35680 557 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 CD86P42081 329 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 EPHB1P54762 984 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 YPEL5P62699 121 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 SKOR1P84550 965 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 TARDBPQ13148 414 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDT1-202ENST00000562747 IRF4Q15306 451 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 WSCD2Q2TBF2 565 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 B4GALNT4Q76KP1 1039 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 ANP32BQ92688 251 aaKnown RBP16.59■□□□□ 0.25
CDT1-202ENST00000562747 IMP4Q96G21 291 aaKnown RBP16.59■□□□□ 0.25
CDT1-202ENST00000562747 TEKT5Q96M29 485 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 HERPUD2Q9BSE4 406 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 MBNL1Q9NR56 388 aaKnown RBP16.59■□□□□ 0.25
CDT1-202ENST00000562747 KCTD5Q9NXV2 234 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 DNPEPQ9ULA0 475 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 CHKBQ9Y259 395 aa16.59■□□□□ 0.25
CDT1-202ENST00000562747 SPTY2D1-AS1A0A0U1RR47 76 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 EIF4E1BA6NMX2 242 aaKnown RBP16.58■□□□□ 0.24
CDT1-202ENST00000562747 A8MX80 341 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 RECQL5O94762 991 aaPredicted RBP16.58■□□□□ 0.24
CDT1-202ENST00000562747 PRLP01236 227 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 EIF2S3P41091 472 aaKnown RBP16.58■□□□□ 0.24
CDT1-202ENST00000562747 OTUD4Q01804 1114 aaKnown RBP16.58■□□□□ 0.24
CDT1-202ENST00000562747 WASHC5Q12768 1159 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 ARHGEF7Q14155 803 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 PTK2BQ14289 1009 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 CNGA3Q16281 694 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 AADACL2Q6P093 401 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 CBARPQ8N350 705 aaPredicted RBP16.58■□□□□ 0.24
CDT1-202ENST00000562747 ACTL9Q8TC94 416 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 HTR3CQ8WXA8 447 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 TADA1Q96BN2 335 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 ALS2CR12Q96Q35 445 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 UBL7Q96S82 380 aaPredicted RBP16.58■□□□□ 0.24
CDT1-202ENST00000562747 FERMT1Q9BQL6 677 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 PRORYQ9H606 182 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 GLOD4Q9HC38 313 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 LZTFL1Q9NQ48 299 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 ASXL3Q9C0F0 2248 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 PTPRQQ9UMZ3 2332 aa16.58■□□□□ 0.24
CDT1-202ENST00000562747 ARID1BQ8NFD5 2236 aaPredicted RBP16.57■□□□□ 0.24
CDT1-202ENST00000562747 GOLGA6L9A6NEM1 432 aa16.57■□□□□ 0.24
CDT1-202ENST00000562747 NPIPB15A6NHN6 443 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms