RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 RYKP34925 604 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 CTCFP49711 727 aaPredicted RBP3.14□□□□□ -1.91
DENND4A-205ENST00000562540 EFNA5P52803 228 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 NR1H2P55055 460 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 CYP4A11Q02928 519 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 NEXNQ0ZGT2 675 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 G3BP1Q13283 466 aaKnown RBP eCLIP3.14□□□□□ -1.91
DENND4A-205ENST00000562540 LPIN1Q14693 890 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 CALCRLQ16602 461 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 ACAD10Q6JQN1 1059 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 FOXL2NBQ6ZUU3 175 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 MB21D2Q8IYB1 491 aaPredicted RBP3.14□□□□□ -1.91
DENND4A-205ENST00000562540 TSPYL6Q8N831 410 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 GJC3Q8NFK1 279 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 GPT2Q8TD30 523 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 MTBPQ96DY7 904 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 SAAL1Q96ER3 474 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 LBHD1Q9BQE6 289 aaPredicted RBP3.14□□□□□ -1.91
DENND4A-205ENST00000562540 TRMT61BQ9BVS5 477 aaKnown RBP3.14□□□□□ -1.91
DENND4A-205ENST00000562540 UNC45AQ9H3U1 944 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 TMEM51Q9NW97 253 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.14□□□□□ -1.91
DENND4A-205ENST00000562540 PAM16Q9Y3D7 125 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 A3GALT2U3KPV4 340 aa3.14□□□□□ -1.91
DENND4A-205ENST00000562540 COL2A1P02458 1487 aaPredicted RBP3.14□□□□□ -1.91
DENND4A-205ENST00000562540 A0A0U1RQF3 1178 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 KLRF2D3W0D1 207 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 FAM72CH0Y354 149 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 J3KRW8 73 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 LDLRAD4O15165 306 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 BCAT2O15382 392 aaPredicted RBP3.13□□□□□ -1.91
DENND4A-205ENST00000562540 TNFSF14O43557 240 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 FGF17O60258 216 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 SLC22A3O75751 556 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 MTA2O94776 668 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 RGS11O94810 467 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 ATP1A3P13637 1013 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 KCNA5P22460 613 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 PAX3P23760 479 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 ELF1P32519 619 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 HARS2P49590 506 aaKnown RBP3.13□□□□□ -1.91
DENND4A-205ENST00000562540 CLDN2P57739 230 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 NLRP5P59047 1200 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 ARHGEF6Q15052 776 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 PPP2R5BQ15173 497 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 HIST2H2ACQ16777 129 aaPredicted RBP3.13□□□□□ -1.91
DENND4A-205ENST00000562540 PRICKLE4Q2TBC4 344 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 ACCSLQ4AC99 568 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 SLC9B1Q4ZJI4 515 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 ESCO2Q56NI9 601 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 FAM72AQ5TYM5 149 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 FAM72DQ6L9T8 149 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 LRRC8EQ6NSJ5 796 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 NEK10Q6ZWH5 1172 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 FAM72BQ86X60 149 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 PARP16Q8N5Y8 322 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 PCYOX1LQ8NBM8 494 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 OR1F2PQ96R84 312 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 MXRA8Q9BRK3 442 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 CLK4Q9HAZ1 481 aaKnown RBP3.13□□□□□ -1.91
DENND4A-205ENST00000562540 PREBQ9HCU5 417 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 CYSLTR2Q9NS75 346 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 TCF19Q9Y242 345 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 FAM96BQ9Y3D0 163 aa3.13□□□□□ -1.91
DENND4A-205ENST00000562540 IGKV3D-15A0A087WSY6 115 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 HNRNPCL2B2RXH8 293 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 TIMM23O14925 209 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 PMS2P2O95744 297 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 HEXAP06865 529 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 RNF224P0DH78 156 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 CHATP28329 748 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 CASP6P55212 293 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 EIF3BP55884 814 aaKnown RBP3.12□□□□□ -1.91
DENND4A-205ENST00000562540 ADORA2A-AS1P86434 159 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 PTP4A2Q12974 167 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 ITGADQ13349 1161 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 RNPS1Q15287 305 aaKnown RBP3.12□□□□□ -1.91
DENND4A-205ENST00000562540 TCTN1Q2MV58 587 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 SETMARQ53H47 684 aaPredicted RBP3.12□□□□□ -1.91
DENND4A-205ENST00000562540 PLA2G4FQ68DD2 849 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 TXNDC8Q6A555 127 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 KLHL24Q6TFL4 600 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 ATF7IPQ6VMQ6 1270 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 SLC46A3Q7Z3Q1 461 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 TDRPQ86YL5 185 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 CADM4Q8NFZ8 388 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 ARRDC2Q8TBH0 407 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 FBXL8Q96CD0 374 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 H2AFJQ9BTM1 129 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 MSTO1Q9BUK6 570 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 PDCL3Q9H2J4 239 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 EBF2Q9HAK2 575 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 BPIFA1Q9NP55 256 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 SMYD2Q9NRG4 433 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 IRAK4Q9NWZ3 460 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 TAS2R10Q9NYW0 307 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 CISD1Q9NZ45 108 aaKnown RBP3.12□□□□□ -1.91
DENND4A-205ENST00000562540 OR6C3Q9NZP0 311 aa3.12□□□□□ -1.91
DENND4A-205ENST00000562540 A0A1W2PPH5 198 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 SNAP23O00161 211 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms