RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GDF10P55107 478 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 YPEL5P62699 121 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 PTSQ03393 145 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 MTM1Q13496 603 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 PRPSAP1Q14558 356 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 CCNG2Q16589 344 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 CDKN3Q16667 212 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 UAP1L1Q3KQV9 507 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 CCDC70Q6NSX1 233 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 ESRP1Q6NXG1 681 aaKnown RBP16.73■□□□□ 0.27
CLK3-207ENST00000562389 DRICH1Q6PGQ1 229 aaPredicted RBP16.73■□□□□ 0.27
CLK3-207ENST00000562389 KDELC2Q7Z4H8 507 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 HSD11B1LQ7Z5J1 315 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 C1orf54Q8WWF1 131 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 NUS1Q96E22 293 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 TM7SF3Q9NS93 570 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 AAR2Q9Y312 384 aaKnown RBP16.73■□□□□ 0.27
CLK3-207ENST00000562389 PCDHGB2Q9Y5G2 931 aa16.73■□□□□ 0.27
CLK3-207ENST00000562389 KNL1Q8NG31 2342 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 SCN8AQ9UQD0 1980 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 C1orf232A0A0U1RR37 186 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 PCCBP05166 539 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 ITGAVP06756 1048 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 C1SP09871 688 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 ATXN1LP0C7T5 689 aaKnown RBP16.72■□□□□ 0.27
CLK3-207ENST00000562389 HLA-DPA1P20036 260 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 ETV3P41162 512 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 TNNT3P45378 269 aaPredicted RBP16.72■□□□□ 0.27
CLK3-207ENST00000562389 ID4P47928 161 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 RXRGP48443 463 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 STC1P52823 247 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 PUM1Q14671 1186 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLK3-207ENST00000562389 LONRF2Q1L5Z9 754 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 P3H1Q32P28 736 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 DENND2CQ68D51 928 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 ARHGEF18Q6ZSZ5 1173 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 TECPR1Q7Z6L1 1165 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 KLHDC8BQ8IXV7 354 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 IPMKQ8NFU5 416 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 SRPK1Q96SB4 655 aaKnown RBP16.72■□□□□ 0.27
CLK3-207ENST00000562389 OSBPL9Q96SU4 736 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 FSD1LQ9BXM9 530 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 MAGEE1Q9HCI5 957 aa16.72■□□□□ 0.27
CLK3-207ENST00000562389 TTC7AQ9ULT0 858 aaPredicted RBP16.72■□□□□ 0.27
CLK3-207ENST00000562389 CEP250Q9BV73 2442 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 A0A0U1RQS6 177 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 SPTY2D1-AS1A0A0U1RR47 76 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 CES2O00748 559 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 PCDHGA12O60330 932 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 CLDN7O95471 211 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 CD59P13987 128 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 ARRB1P49407 418 aaPredicted RBP16.71■□□□□ 0.27
CLK3-207ENST00000562389 PDE1CQ14123 709 aaPredicted RBP16.71■□□□□ 0.27
CLK3-207ENST00000562389 PTK2BQ14289 1009 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 INPP5AQ14642 412 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 SHBQ15464 509 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 SLC1A5Q15758 541 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 PARP6Q2NL67 630 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 Q6ZVL8 140 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 ZNF765Q7L2R6 523 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 PARGQ86W56 976 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 HOMER3Q9NSC5 361 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 SNX12Q9UMY4 172 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 ZNF148Q9UQR1 794 aa16.71■□□□□ 0.27
CLK3-207ENST00000562389 LRP4O75096 1905 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 GOLGA6CA6NDK9 693 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 FGF1P05230 155 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 GOLGA6DP0CG33 693 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 TSHRP16473 764 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 TEAD1P28347 426 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 EPHA8P29322 1005 aaPredicted RBP16.7■□□□□ 0.26
CLK3-207ENST00000562389 ADRA1AP35348 466 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 TRIM23P36406 574 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 THOP1P52888 689 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 DPTQ07507 201 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 SNX1Q13596 522 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 FZD2Q14332 565 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 SIRPB2Q5JXA9 342 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 PRAMEF14Q5SWL7 426 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 TPRG1LQ5T0D9 272 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 PNCKQ6P2M8 343 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 MACC1Q6ZN28 852 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 DBX2Q6ZNG2 339 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 LYSMD3Q7Z3D4 306 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 NLRP8Q86W28 1048 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 NRSN1Q8IZ57 195 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 PLA2G15Q8NCC3 412 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 CCHCR1Q8TD31 782 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 NAP1L3Q99457 506 aaPredicted RBP16.7■□□□□ 0.26
CLK3-207ENST00000562389 APOOQ9BUR5 198 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 FICDQ9BVA6 458 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 ZFYVE1Q9HBF4 777 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 GOLGA6AQ9NYA3 693 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 PKD2L2Q9NZM6 624 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 DRG1Q9Y295 367 aaKnown RBP16.7■□□□□ 0.26
CLK3-207ENST00000562389 ZNF711Q9Y462 761 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 CFAP54Q96N23 3096 aa16.7■□□□□ 0.26
CLK3-207ENST00000562389 RGSL1A5PLK6 1076 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms