RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 B4GALT6Q9UBX8 382 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 FZD10Q9ULW2 581 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 SUFUQ9UMX1 484 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 TMEM98Q9Y2Y6 226 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 PRKAB1Q9Y478 270 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 DGKBQ9Y6T7 804 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 LOC101059948A0A1B0GTJ6 334 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 ZSCAN5CA6NGD5 496 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 TOR1BO14657 336 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 MTSS1O43312 755 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 NUDT21O43809 227 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 RAD1O60671 282 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 PALMO75781 387 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 EML2O95834 649 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 CYP1A1P04798 512 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 CCNB1P14635 433 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 OAS2P29728 719 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 ETV3P41162 512 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 PTPN9P43378 593 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 SCNN1BP51168 640 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 MLLT10P55197 1068 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 TPI1P60174 286 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 POLR2FP61218 127 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 FOXK1P85037 733 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 CDR2Q01850 454 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 OGDHQ02218 1023 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 INO80DQ53TQ3 878 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 TMEM164Q5U3C3 297 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 PNCKQ6P2M8 343 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 STRADAQ7RTN6 431 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 OR6C4Q8NGE1 309 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 ATL2Q8NHH9 583 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 CENPIQ92674 756 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 NUS1Q96E22 293 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 TAAR9Q96RI9 348 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 SEMA3CQ99985 751 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 CINPQ9BW66 212 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 VPS16Q9H269 839 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 GANQ9H2C0 597 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 ATP13A3Q9H7F0 1226 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 ADAM22Q9P0K1 906 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 AKAP7Q9P0M2 348 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 SEPT3Q9UH03 358 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 MAN2B2Q9Y2E5 1009 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 CELSR2Q9HCU4 2923 aa11.69□□□□□ -0.54
NSMCE1-202ENST00000561960 CACNA1DQ01668 2161 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 PRAMEF11O60813 436 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 CEACAM5P06731 702 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 CTPS1P17812 591 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 CR2P20023 1033 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 SERPINA4P29622 427 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 CCR10P46092 362 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 UQCRFS1P47985 274 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 CTBSQ01459 385 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 BCL2L1Q07817 233 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 CNGA3Q16281 694 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 PARP15Q460N3 678 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 ACBD5Q5T8D3 534 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 DPPA4Q7L190 304 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 HSD11B1LQ7Z5J1 315 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 TSPAN33Q86UF1 283 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 NAGSQ8N159 534 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 NPWQ8N729 165 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 C9orf43Q8TAL5 461 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 KIAA1524Q8TCG1 905 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 LRRC19Q9H756 370 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 SP110Q9HB58 689 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 KCNK4Q9NYG8 393 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 PCDHGC4Q9Y5F7 938 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 PCYT1BQ9Y5K3 369 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 ITPR2Q14571 2701 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 LRBAP50851 2863 aa11.68□□□□□ -0.54
NSMCE1-202ENST00000561960 IGHV1OR21-1A0A087WYE8 117 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 TMCO5BA8MYB1 307 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 MAP3K6O95382 1288 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 SFTPCP11686 197 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 MYCLP1P12525 358 aaPredicted RBP11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 GP1BBP13224 206 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 PNLIPP16233 465 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 CSTF2P33240 577 aaKnown RBP eCLIP11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 ADCY8P40145 1251 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 ACTR1BP42025 376 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 NSFP46459 744 aaKnown RBP11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 LIMK2P53671 638 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 ACTR1AP61163 376 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 MAXP61244 160 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 ILF3Q12906 894 aaKnown RBP eCLIP11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 NFATC2Q13469 925 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 NCAPHQ15003 741 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 FAM182AQ5T1J6 154 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 RAET1GQ6H3X3 334 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 DNAJC24Q6P3W2 148 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 BRAT1Q6PJG6 821 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 TIPARPQ7Z3E1 657 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms