RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GSTA3Q16772 222 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 HIST2H2ACQ16777 129 aaPredicted RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 SLC9B1Q4ZJI4 515 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ATG9BQ674R7 924 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 C17orf99Q6UX52 265 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 NEK10Q6ZWH5 1172 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 SLC46A3Q7Z3Q1 461 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ANKRD13BQ86YJ7 626 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 CAMK1DQ8IU85 385 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ADSSL1Q8N142 457 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 SLC25A41Q8N5S1 370 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 PDILTQ8N807 584 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 SLC44A5Q8NCS7 719 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ZMIZ2Q8NF64 920 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 TMEM170AQ8WVE7 144 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 POMGNT1Q8WZA1 660 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 FAM149B1Q96BN6 582 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 CDCA5Q96FF9 252 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ZNF333Q96JL9 665 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ZFYVE19Q96K21 471 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 KLHL15Q96M94 604 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 NR1H4Q96RI1 486 aaPredicted RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 CLSTN3Q9BQT9 956 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 H2AFJQ9BTM1 129 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 FRMD8Q9BZ67 464 aaPredicted RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 TTYH1Q9H313 450 aaPredicted RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 TASP1Q9H6P5 420 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 SYNCQ9H7C4 482 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ZCCHC17Q9NP64 241 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 EIF2B3Q9NR50 452 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 SNTG1Q9NSN8 517 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 EHD2Q9NZN4 543 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 HDAC6Q9UBN7 1215 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 LIMA1Q9UHB6 759 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 TRMT112Q9UI30 125 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 CDH22Q9UJ99 828 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 AGO2Q9UKV8 859 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 NAALADL1Q9UQQ1 740 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 RAP2CQ9Y3L5 183 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 THSD7BQ9C0I4 1608 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ZNF804BA4D1E1 1349 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ADAMTS7Q9UKP4 1686 aa3.9□□□□□ -1.78
HERC1-215ENST00000561436 ANKRD26Q9UPS8 1709 aa3.9□□□□□ -1.78
HERC1-215ENST00000561436 ADAMTSL1Q8N6G6 1762 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 RGPD5Q99666 1765 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 TYW5A2RUC4 315 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 PABPN1LA6NDY0 278 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 INO80B-WBP1J3KQ70 363 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 GTPBP1O00178 669 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 ECE2O60344 883 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 USO1O60763 962 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 TACC1O75410 805 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 CTSAP10619 480 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ZNF8P17098 575 aaPredicted RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 CD72P21854 359 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ATP5F1P24539 256 aaPredicted RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 CPOXP36551 454 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 DPP6P42658 865 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 SSBP2P81877 361 aaPredicted RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 CYP4A11Q02928 519 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 GAD2Q05329 585 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 DAZAP2Q15038 168 aaPredicted RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 RABEP1Q15276 862 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ME3Q16798 604 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ZNF667Q5HYK9 610 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 C6orf10Q5SRN2 563 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 SPATA1Q5VX52 437 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ZNF425Q6IV72 752 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 CDC73Q6P1J9 531 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 MCM10Q7L590 875 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 C1QL2Q7Z5L3 287 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 GPAT4Q86UL3 456 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 APOBEC3FQ8IUX4 373 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 ZDHHC23Q8IYP9 409 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ANKRD52Q8NB46 1076 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 TBC1D16Q8TBP0 767 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 NEK9Q8TD19 979 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 SMG7Q92540 1137 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 KAT2AQ92830 837 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 SIGLEC11Q96RL6 698 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 SDF4Q9BRK5 362 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 CHCHD6Q9BRQ6 235 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 WDR83Q9BRX9 315 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 PRSS22Q9GZN4 317 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 COA1Q9GZY4 146 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 AAMDCQ9H7C9 122 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ZNF304Q9HCX3 659 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 MLXIPLQ9NP71 852 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 MYOZ2Q9NPC6 264 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 PNRC2Q9NPJ4 139 aaKnown RBP3.9□□□□□ -1.79
HERC1-215ENST00000561436 C20orf141Q9NUB4 165 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ZDHHC7Q9NXF8 308 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 CARD8Q9Y2G2 431 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.9□□□□□ -1.79
HERC1-215ENST00000561436 LYVE1Q9Y5Y7 322 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 ARFGEF1Q9Y6D6 1849 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 KDM3AQ9Y4C1 1321 aa3.9□□□□□ -1.79
HERC1-215ENST00000561436 TAF1LQ8IZX4 1826 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 TARSL2A2RTX5 802 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 FAM157AC9JC47 383 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms