RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 UCKL1Q9NWZ5 548 aa10.14□□□□□ -0.79
HERC1-212ENST00000561348 TRMT1Q9NXH9 659 aaKnown RBP10.14□□□□□ -0.79
HERC1-212ENST00000561348 AMACRQ9UHK6 382 aa10.14□□□□□ -0.79
HERC1-212ENST00000561348 PCOLCE2Q9UKZ9 415 aa10.14□□□□□ -0.79
HERC1-212ENST00000561348 SHOC2Q9UQ13 582 aa10.14□□□□□ -0.79
HERC1-212ENST00000561348 PPP2R2CQ9Y2T4 447 aa10.14□□□□□ -0.79
HERC1-212ENST00000561348 A0A0J9YYE9 177 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 SPTY2D1-AS1A0A0U1RR47 76 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 K7ESM1 405 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 CACNB4O00305 520 aaPredicted RBP10.13□□□□□ -0.79
HERC1-212ENST00000561348 DDX3YO15523 660 aaKnown RBP10.13□□□□□ -0.79
HERC1-212ENST00000561348 MTSS1O43312 755 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 RASGRP1O95267 797 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 ASMTLO95671 621 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 TRBC1P01850 177 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 MMP2P08253 660 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 ZNF883P0CG24 379 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 MYF5P13349 255 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 LHCGRP22888 699 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 GPR1P46091 355 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 HNRNPKP61978 463 aaKnown RBP eCLIP10.13□□□□□ -0.79
HERC1-212ENST00000561348 PPARDQ03181 441 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 WASHC5Q12768 1159 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 DNAJC3Q13217 504 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 SNX1Q13596 522 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 NOMO1Q15155 1222 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 PRRT3Q5FWE3 981 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 ALS2CLQ60I27 953 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 CRTC1Q6UUV9 634 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 NYAP1Q6ZVC0 841 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 PARGQ86W56 976 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 DCP2Q8IU60 420 aaKnown RBP10.13□□□□□ -0.79
HERC1-212ENST00000561348 ZNF567Q8N184 647 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 SAP25Q8TEE9 199 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 ASB12Q8WXK4 309 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 FATE1Q969F0 183 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 IMP4Q96G21 291 aaKnown RBP10.13□□□□□ -0.79
HERC1-212ENST00000561348 CNDP2Q96KP4 475 aaKnown RBP10.13□□□□□ -0.79
HERC1-212ENST00000561348 TEKT5Q96M29 485 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 QKIQ96PU8 341 aaKnown RBP eCLIP10.13□□□□□ -0.79
HERC1-212ENST00000561348 CDC6Q99741 560 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 GPR63Q9BZJ6 419 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 SLC25A51Q9H1U9 297 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 TCEAL2Q9H3H9 227 aaPredicted RBP10.13□□□□□ -0.79
HERC1-212ENST00000561348 ERVMER34-1Q9H9K5 563 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 KLQ9UEF7 1012 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 APOBEC3BQ9UH17 382 aaKnown RBP10.13□□□□□ -0.79
HERC1-212ENST00000561348 DNAH14Q0VDD8 3507 aa10.13□□□□□ -0.79
HERC1-212ENST00000561348 TCRBV7S2A1N4TA0A589 114 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 HACD1B0YJ81 288 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 ANKRD66B4E2M5 251 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 C10orf142B7Z368 130 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 INPP4BO15327 924 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 YKT6O15498 198 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 PCDHGA12O60330 932 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 TOP3BO95985 862 aaKnown RBP10.12□□□□□ -0.79
HERC1-212ENST00000561348 ATXN1LP0C7T5 689 aaKnown RBP10.12□□□□□ -0.79
HERC1-212ENST00000561348 FTH1P19P0C7X4 201 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 ALPPL2P10696 532 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 DGKAP23743 735 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 CXCR5P32302 372 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 PFN3P60673 137 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 YPEL5P62699 121 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 CDK18Q07002 472 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 EIF2B5Q13144 721 aaKnown RBP10.12□□□□□ -0.79
HERC1-212ENST00000561348 PRPSAP1Q14558 356 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 QPCTQ16769 361 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 DEFB133Q30KQ1 61 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 ITPRIPL1Q6GPH6 555 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 PNCKQ6P2M8 343 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 ARHGEF18Q6ZSZ5 1173 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 MARK2Q7KZI7 788 aaKnown RBP10.12□□□□□ -0.79
HERC1-212ENST00000561348 TRIM74Q86UV6 250 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 PHACTR4Q8IZ21 702 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 PELI3Q8N2H9 469 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 CHCHD4Q8N4Q1 142 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 CCDC110Q8TBZ0 833 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 CCHCR1Q8TD31 782 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 ATG4AQ8WYN0 398 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 SCAMP4Q969E2 229 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 AP2M1Q96CW1 435 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 WDR92Q96MX6 357 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 APOL2Q9BQE5 337 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 RIOK2Q9BVS4 552 aaKnown RBP10.12□□□□□ -0.79
HERC1-212ENST00000561348 FSD1LQ9BXM9 530 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 WDR26Q9H7D7 661 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 CYP4F12Q9HCS2 524 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 MRPL40Q9NQ50 206 aaKnown RBP10.12□□□□□ -0.79
HERC1-212ENST00000561348 SIRPGQ9P1W8 387 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 GULP1Q9UBP9 304 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 FAM153AQ9UHL3 310 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 KLF15Q9UIH9 416 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 APOBEC2Q9Y235 224 aaKnown RBP10.12□□□□□ -0.79
HERC1-212ENST00000561348 PCDHGB2Q9Y5G2 931 aa10.12□□□□□ -0.79
HERC1-212ENST00000561348 NEMP2A6NFY4 417 aa10.11□□□□□ -0.79
HERC1-212ENST00000561348 TMEM202A6NGA9 273 aa10.11□□□□□ -0.79
HERC1-212ENST00000561348 CAPN8A6NHC0 703 aa10.11□□□□□ -0.79
HERC1-212ENST00000561348 PCNX2A6NKB5 2137 aa10.11□□□□□ -0.79
HERC1-212ENST00000561348 TRIM38O00635 465 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms