RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 GDF10P55107 478 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 SIX1Q15475 284 aaPredicted RBP13.91□□□□□ -0.18
TPM1-230ENST00000561266 RBFAQ8N0V3 343 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 SLC35B2Q8TB61 432 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 SETD7Q8WTS6 366 aaKnown RBP13.91□□□□□ -0.18
TPM1-230ENST00000561266 PTCD2Q8WV60 388 aaKnown RBP13.91□□□□□ -0.18
TPM1-230ENST00000561266 SKA1Q96BD8 255 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 DTD2Q96FN9 168 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 MRGPRX2Q96LB1 330 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 FCRL5Q96RD9 977 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 AGAP2Q99490 1192 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 APOOQ9BUR5 198 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 MLPHQ9BV36 600 aaPredicted RBP13.91□□□□□ -0.18
TPM1-230ENST00000561266 LGR4Q9BXB1 951 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 ABCG8Q9H221 673 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 KLHL8Q9P2G9 620 aaPredicted RBP13.91□□□□□ -0.18
TPM1-230ENST00000561266 DNPEPQ9ULA0 475 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 SPO11Q9Y5K1 396 aa13.91□□□□□ -0.18
TPM1-230ENST00000561266 AURKAO14965 403 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 KCNN4O15554 427 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 SOD1P00441 154 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 FUCA1P04066 466 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 CELA2BP08218 269 aaPredicted RBP13.9□□□□□ -0.18
TPM1-230ENST00000561266 ATXN1LP0C7T5 689 aaKnown RBP13.9□□□□□ -0.18
TPM1-230ENST00000561266 CYP2A6P11509 494 aaPredicted RBP13.9□□□□□ -0.18
TPM1-230ENST00000561266 CEACAM1P13688 526 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 DGKAP23743 735 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 STC1P52823 247 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 EPHB1P54762 984 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 WNT3AP56704 352 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 CDK18Q07002 472 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 RPS6KA1Q15418 735 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 ANKRD20A2Q5SQ80 823 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 ANKRD20A1Q5TYW2 823 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 ANKRD20A3Q5VUR7 823 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 DARS2Q6PI48 645 aaKnown RBP13.9□□□□□ -0.18
TPM1-230ENST00000561266 USP45Q70EL2 814 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 PRUNE1Q86TP1 453 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 SLCO6A1Q86UG4 719 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 SLC13A5Q86YT5 568 aaPredicted RBP13.9□□□□□ -0.18
TPM1-230ENST00000561266 CCDC110Q8TBZ0 833 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 RHBDD1Q8TEB9 315 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 SCAMP4Q969E2 229 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 LYSMD1Q96S90 227 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 TOR4AQ9NXH8 423 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 TRMT1Q9NXH9 659 aaKnown RBP13.9□□□□□ -0.18
TPM1-230ENST00000561266 PYCARDQ9ULZ3 195 aa13.9□□□□□ -0.18
TPM1-230ENST00000561266 COL5A1P20908 1838 aaPredicted RBP13.9□□□□□ -0.18
TPM1-230ENST00000561266 ARHGEF17Q96PE2 2063 aaPredicted RBP13.89□□□□□ -0.19
TPM1-230ENST00000561266 PTPRBP23467 1997 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 ASXL3Q9C0F0 2248 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 LOC285095A0A1B0GVY8 99 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 TMEM202A6NGA9 273 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 TRIM38O00635 465 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 ENC1O14682 589 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 DFNA5O60443 496 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 MAGEC1O60732 1142 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 GCATO75600 419 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 PIAS2O75928 621 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 AGTP01019 485 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 CSF2P04141 144 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 MYF5P13349 255 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 PSMB4P28070 264 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 CXCR5P32302 372 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 TRIM23P36406 574 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 RPL26P61254 145 aaKnown RBP13.89□□□□□ -0.19
TPM1-230ENST00000561266 MTM1Q13496 603 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 GSE1Q14687 1217 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 SLC14A2Q15849 920 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 ESRP1Q6NXG1 681 aaKnown RBP13.89□□□□□ -0.19
TPM1-230ENST00000561266 PNCKQ6P2M8 343 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 LYSMD3Q7Z3D4 306 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 CDKL3Q8IVW4 592 aaPredicted RBP13.89□□□□□ -0.19
TPM1-230ENST00000561266 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 FAM71DQ8N9W8 422 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 C1orf54Q8WWF1 131 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 TSACCQ96A04 125 aaPredicted RBP13.89□□□□□ -0.19
TPM1-230ENST00000561266 NUS1Q96E22 293 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 TMEM121Q9BTD3 319 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 C1QTNF7Q9BXJ2 289 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 MRPL40Q9NQ50 206 aaKnown RBP13.89□□□□□ -0.19
TPM1-230ENST00000561266 DNAJC28Q9NX36 388 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 FAM153AQ9UHL3 310 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 RPL26L1Q9UNX3 145 aaKnown RBP13.89□□□□□ -0.19
TPM1-230ENST00000561266 SHOC2Q9UQ13 582 aa13.89□□□□□ -0.19
TPM1-230ENST00000561266 PLXNB3Q9ULL4 1909 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 PSMD11O00231 422 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 FLRT2O43155 660 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 MTSS1O43312 755 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 METTL18O95568 372 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 NDST3O95803 873 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 ITGAVP06756 1048 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 NME1P15531 152 aaKnown RBP13.88□□□□□ -0.19
TPM1-230ENST00000561266 CETN2P41208 172 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 ARRB1P49407 418 aaPredicted RBP13.88□□□□□ -0.19
TPM1-230ENST00000561266 YPEL5P62699 121 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 C1orf61Q13536 156 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 ARHGEF7Q14155 803 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 NFATC4Q14934 902 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 TCEA2Q15560 299 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms