RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ATG16L1Q676U5 607 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 GRAMD4Q6IC98 578 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 TANGO2Q6ICL3 276 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 DPY19L3Q6ZPD9 716 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 RAPH1Q70E73 1250 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 NUDCD3Q8IVD9 361 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 SLC41A1Q8IVJ1 513 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 CPA6Q8N4T0 437 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 CCDC197Q8NCU1 140 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 ACVR1CQ8NER5 493 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 RDH11Q8TC12 318 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 FRS2Q8WU20 508 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 VOPP1Q96AW1 172 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 LRIG1Q96JA1 1093 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 OMDQ99983 421 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 PLCD4Q9BRC7 762 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 S1PR5Q9H228 398 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 ECT2Q9H8V3 914 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 CAB39LQ9H9S4 337 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 DEC1Q9P2X7 70 aa17.13■□□□□ 0.33
HDDC3-206ENST00000561036 KIF26AQ9ULI4 1882 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-206ENST00000561036 MYOFQ9NZM1 2061 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 WDR91A4D1P6 747 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 OR51F1A6NGY5 319 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 CCL22O00626 93 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 SNX3O60493 162 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 SLC35E2BP0CK96 405 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 PMLP29590 882 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 SLC26A3P40879 764 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 MTHFRP42898 656 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 KPNA2P52292 529 aaKnown RBP17.12■□□□□ 0.33
HDDC3-206ENST00000561036 TAS2R39P59534 338 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 TSNAXIP1Q2TAA8 658 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 GAB4Q2WGN9 574 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 HECTD2Q5U5R9 776 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 FAM45BPQ6NSW5 357 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 VITQ6UXI7 678 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 GDPD4Q6W3E5 623 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 USP45Q70EL2 814 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 CBARPQ8N350 705 aaPredicted RBP17.12■□□□□ 0.33
HDDC3-206ENST00000561036 PAF1Q8N7H5 531 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 ANKS4BQ8N8V4 417 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 OR2A12Q8NGT7 310 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 FAM45AQ8TCE6 357 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 HCAR2Q8TDS4 363 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 ELSPBP1Q96BH3 223 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 ELAC2Q9BQ52 826 aaKnown RBP17.12■□□□□ 0.33
HDDC3-206ENST00000561036 HEPHQ9BQS7 1158 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 OSBPL1AQ9BXW6 950 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 EBF3Q9H4W6 596 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 ZNF576Q9H609 170 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 ZFYVE1Q9HBF4 777 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 ELOVL2Q9NXB9 296 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 TMEM216Q9P0N5 145 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 CLEC1BQ9P126 229 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 VWA7Q9Y334 891 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 CHD9Q3L8U1 2897 aa17.12■□□□□ 0.33
HDDC3-206ENST00000561036 F7P08709 466 aaPredicted RBP17.11■□□□□ 0.33
HDDC3-206ENST00000561036 CTPS1P17812 591 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 NFKBIAP25963 317 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 GKP32189 559 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 HNF1BP35680 557 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 TTPAP49638 278 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 ST8SIA6P61647 398 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 CDKN3Q16667 212 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 CTC1Q2NKJ3 1217 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 GLIPR1L2Q4G1C9 344 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 C16orf46Q6P387 395 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 BRAT1Q6PJG6 821 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 Q6ZVU0 165 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 LYSMD3Q7Z3D4 306 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 SPATA21Q7Z572 469 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 CCDC63Q8NA47 563 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 TTC8Q8TAM2 541 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 SCRN2Q96FV2 425 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 MCCC1Q96RQ3 725 aaPredicted RBP17.11■□□□□ 0.33
HDDC3-206ENST00000561036 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 CIPCQ9C0C6 399 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 ZDHHC6Q9H6R6 413 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 NMRAL1Q9HBL8 299 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 POPDC3Q9HBV1 291 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 HPS4Q9NQG7 708 aa17.11■□□□□ 0.33
HDDC3-206ENST00000561036 USP15Q9Y4E8 981 aaPredicted RBP17.11■□□□□ 0.33
HDDC3-206ENST00000561036 TSPAN11A1L157 253 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 TRIM24O15164 1050 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 PHGDHO43175 533 aaKnown RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 NDUFS3O75489 264 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 KLHL2O95198 593 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 TOP3BO95985 862 aaKnown RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 ALPIP09923 528 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 SAT1P21673 171 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 BGNP21810 368 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 MC4RP32245 332 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 EIF2DP41214 584 aaKnown RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 PRKAA2P54646 552 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 XIAPP98170 497 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms