RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 A0A0D9SEW6 157 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 TMEM8BA6NDV4 472 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 E9PAM4 449 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 I6L893 689 aaPredicted RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 VILLO15195 856 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 SMAD6O43541 496 aaKnown RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 CLDN11O75508 207 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 DRD3P35462 400 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 CTSKP43235 329 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 RECQLP46063 649 aaPredicted RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 ARRB1P49407 418 aaPredicted RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 CXCR3P49682 368 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 CDH4P55283 916 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 KRT83P78385 493 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 DNAJC3Q13217 504 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 KRT31Q15323 416 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 C15orf59Q2T9L4 293 aaPredicted RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 SLC25A52Q3SY17 297 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 RAB6CQ53S08 254 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 BRMS1LQ5PSV4 323 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 FKBP15Q5T1M5 1219 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 TRNP1Q6NT89 227 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 RWDD4Q6NW29 188 aaKnown RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 C19orf48Q6RUI8 117 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 LEKR1Q6ZMV7 388 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 PRPF39Q86UA1 669 aaKnown RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 ZNF354CQ86Y25 554 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 XYLT1Q86Y38 959 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 RYBPQ8N488 228 aaPredicted RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 SH2D3CQ8N5H7 860 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 EID2Q8N6I1 236 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 KDM1BQ8NB78 822 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 CHST14Q8NCH0 376 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 ZNF397Q8NF99 534 aaPredicted RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 SLC30A5Q8TAD4 765 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 CNDP2Q96KP4 475 aaKnown RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 CCDC114Q96M63 670 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 ELF4Q99607 663 aaPredicted RBP7.48□□□□□ -1.21
SPG11-213ENST00000558988 ORAI3Q9BRQ5 295 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 RAB6CQ9H0N0 254 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 FZD3Q9NPG1 666 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 DYRK4Q9NR20 520 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 GDF3Q9NR23 364 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 ACTL7AQ9Y615 435 aa7.48□□□□□ -1.21
SPG11-213ENST00000558988 IGF2RP11717 2491 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 GOLGA4Q13439 2230 aaKnown RBP7.47□□□□□ -1.21
SPG11-213ENST00000558988 DOCK9Q9BZ29 2069 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 USP24Q9UPU5 2620 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 A0A1B0GTQ1 180 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 A0A1W2PQU0 124 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 TLR4O00206 839 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 EPHB6O15197 1021 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 TNFSF14O43557 240 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 PCDH8O95206 1070 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 PRAMEF1O95521 474 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 LDOC1O95751 146 aaPredicted RBP7.47□□□□□ -1.21
SPG11-213ENST00000558988 LSM8O95777 96 aaKnown RBP7.47□□□□□ -1.21
SPG11-213ENST00000558988 F9P00740 461 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 SRCP12931 536 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 EEF1GP26641 437 aaKnown RBP7.47□□□□□ -1.21
SPG11-213ENST00000558988 CHRNA3P32297 505 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 CCR5P51681 352 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 PLK1P53350 603 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 NXPH1P58417 271 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 NOMO3P69849 1222 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 EIF4EBP2Q13542 120 aaPredicted RBP7.47□□□□□ -1.21
SPG11-213ENST00000558988 STAT4Q14765 748 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 NAPEPLDQ6IQ20 393 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 DPY19L2P1Q6NXN4 242 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 ZNF585AQ6P3V2 769 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 C22orf39Q6P5X5 142 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 ZDHHC17Q8IUH5 632 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 OR6K2Q8NGY2 324 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 GPT2Q8TD30 523 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 RXFP2Q8WXD0 754 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 ARRDC3Q96B67 414 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 ALG14Q96F25 216 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 PSMB7Q99436 277 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 CDADC1Q9BWV3 514 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 CALN1Q9BXU9 219 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 STK33Q9BYT3 514 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 TM6SF2Q9BZW4 377 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 GANQ9H2C0 597 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 ZDHHC6Q9H6R6 413 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 CAAP1Q9H8G2 361 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 ARHGEF38Q9NXL2 777 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 RRN3Q9NYV6 651 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 ADAMTS1Q9UHI8 967 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 PAXBP1Q9Y5B6 917 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 PCDHGB2Q9Y5G2 931 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 OR51B4Q9Y5P0 310 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 DNAH14Q0VDD8 3507 aa7.47□□□□□ -1.21
SPG11-213ENST00000558988 A0A1W2PR77 199 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 RNF103O00237 685 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 TAF4O00268 1085 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 MCF2LO15068 1137 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 FFAR2O15552 330 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 PLRG1O43660 514 aaKnown RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 PCDHGA12O60330 932 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms