RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 AGAP3Q96P47 875 aa13.61□□□□□ -0.23
TMED3-205ENST00000558562 DDX50Q9BQ39 737 aaKnown RBP13.61□□□□□ -0.23
TMED3-205ENST00000558562 WDR83Q9BRX9 315 aaKnown RBP13.61□□□□□ -0.23
TMED3-205ENST00000558562 NOL6Q9H6R4 1146 aaKnown RBP13.61□□□□□ -0.23
TMED3-205ENST00000558562 ATMQ13315 3056 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 MATN3O15232 486 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 RGS16O15492 202 aaPredicted RBP13.6□□□□□ -0.23
TMED3-205ENST00000558562 MAFKO60675 156 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 RAMP2O60895 175 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 NEBLO76041 1014 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 SEMA4FO95754 770 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 LATS1O95835 1130 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 CPP00450 1065 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 SLC6A4P31645 630 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 CD68P34810 354 aaPredicted RBP13.6□□□□□ -0.23
TMED3-205ENST00000558562 ELK3P41970 407 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 SLCO1A2P46721 670 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 GRIA4P48058 902 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 GYS2P54840 703 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 TARDBPQ13148 414 aaKnown RBP eCLIP13.6□□□□□ -0.23
TMED3-205ENST00000558562 MTM1Q13496 603 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 PRPSAP1Q14558 356 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 LONRF1Q17RB8 773 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 C5orf22Q49AR2 442 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 CAND1Q86VP6 1230 aaKnown RBP13.6□□□□□ -0.23
TMED3-205ENST00000558562 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 PALM2Q8IXS6 379 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 OR2T3Q8NH03 318 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 LRRC39Q96DD0 335 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 MYEOVQ96EZ4 313 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 HMCESQ96FZ2 354 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 TEKT5Q96M29 485 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 STMN4Q9H169 189 aaPredicted RBP13.6□□□□□ -0.23
TMED3-205ENST00000558562 PCED1AQ9H1Q7 454 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 RETREG1Q9H6L5 497 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 SP110Q9HB58 689 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 ZNF212Q9UDV6 495 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 IPO11Q9UI26 975 aaKnown RBP13.6□□□□□ -0.23
TMED3-205ENST00000558562 TEX264Q9Y6I9 313 aa13.6□□□□□ -0.23
TMED3-205ENST00000558562 EXOC1LA0A1B0GW35 172 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
TMED3-205ENST00000558562 AVILO75366 819 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 SPAG6O75602 509 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 TCEA3O75764 348 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 MLNP12872 115 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 CCNB1P14635 433 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 CD27P26842 260 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 HNF1BP35680 557 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 CTSKP43235 329 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 MAGEA3P43357 314 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 GPX6P59796 221 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 SKIDA1Q1XH10 827 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 PARP15Q460N3 678 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 RIBC1Q8N443 379 aaPredicted RBP13.59□□□□□ -0.23
TMED3-205ENST00000558562 DDI1Q8WTU0 396 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 MAML1Q92585 1016 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 TLCD1Q96CP7 247 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 PGM2Q96G03 612 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 CFAP36Q96G28 342 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 PRICKLE1Q96MT3 831 aaPredicted RBP13.59□□□□□ -0.23
TMED3-205ENST00000558562 IL12RB2Q99665 862 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 GORASP1Q9BQQ3 440 aa13.59□□□□□ -0.23
TMED3-205ENST00000558562 AGO1Q9UL18 857 aaKnown RBP13.59□□□□□ -0.23
TMED3-205ENST00000558562 NOVA2Q9UNW9 492 aaKnown RBP13.59□□□□□ -0.23
TMED3-205ENST00000558562 TP53BP1Q12888 1972 aaPredicted RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 MYO18BQ8IUG5 2567 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 HECTD1Q9ULT8 2610 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 ERI2A8K979 691 aaKnown RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 PSMD3O43242 534 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 TSPAN3O60637 253 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 LDOC1O95751 146 aaPredicted RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 AP2A1O95782 977 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 AGTP01019 485 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 NR1D1P20393 614 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 SSTR1P30872 391 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 OR1E1P30953 314 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 CDH4P55283 916 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 YBEYP58557 167 aaPredicted RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 CAMK2GQ13555 558 aaPredicted RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 POLD3Q15054 466 aaPredicted RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 EIF4HQ15056 248 aaKnown RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 KLHL38Q2WGJ6 581 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 INAVAQ3KP66 663 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 FNDC3BQ53EP0 1204 aaKnown RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 ADGRF1Q5T601 910 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 TTC39BQ5VTQ0 682 aaPredicted RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 LRRC8BQ6P9F7 803 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 PCSK4Q6UW60 755 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 CHST9Q7L1S5 443 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 CFAP52Q8N1V2 620 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 AGGF1Q8N302 714 aaeCLIP13.58□□□□□ -0.24
TMED3-205ENST00000558562 NSMCE1Q8WV22 266 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 FATE1Q969F0 183 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 CNDP2Q96KP4 475 aaKnown RBP13.58□□□□□ -0.24
TMED3-205ENST00000558562 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
TMED3-205ENST00000558562 ORAI3Q9BRQ5 295 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms