RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 BCAS4Q8TDM0 211 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 EME1Q96AY2 570 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 TRIM31Q9BZY9 425 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 LRRCC1Q9C099 1032 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 HIPK3Q9H422 1215 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 ACAD9Q9H845 621 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 IL21RQ9HBE5 538 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 RAVER2Q9HCJ3 691 aaKnown RBP5.45□□□□□ -1.54
HIF1A-209ENST00000556827 ERVK-5Q9HDB9 667 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 THEGQ9P2T0 379 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 KLQ9UEF7 1012 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 DERAQ9Y315 318 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 PKP3Q9Y446 797 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 PHIPQ8WWQ0 1821 aa5.45□□□□□ -1.54
HIF1A-209ENST00000556827 B4DLN1 442 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 USP12O75317 370 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 OAZ2O95190 189 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 NDUFB10O96000 172 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 PSG1P11464 419 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 PKMP14618 531 aaKnown RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 CIITAP33076 1130 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 SLC1A4P43007 532 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 PPM1FP49593 454 aaPredicted RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 MRPL12P52815 198 aaKnown RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 SRSF1Q07955 248 aaKnown RBP eCLIP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 SBK1Q52WX2 424 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 C10orf76Q5T2E6 689 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 RUSC1-AS1Q66K80 236 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 RINLQ6ZS11 566 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 ARMCX2Q7L311 632 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 ANKS1BQ7Z6G8 1248 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 PIP4P1Q86T03 277 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 PIM3Q86V86 326 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 ARFGAP1Q8N6T3 406 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 ENDOVQ8N8Q3 282 aaKnown RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 ZNF548Q8NEK5 533 aaPredicted RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 C2CD4CQ8TF44 421 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 SDCCAG3Q96C92 435 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 TRMOQ9BU70 441 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 C1QTNF1Q9BXJ1 281 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 FRMD8Q9BZ67 464 aaPredicted RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 UPF3AQ9H1J1 476 aaKnown RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 SLC38A10Q9HBR0 1119 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 SLC22A11Q9NSA0 550 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 ECHDC1Q9NTX5 307 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 THAP1Q9NVV9 213 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 TBX21Q9UL17 535 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 LAMP3Q9UQV4 416 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 TNFSF13BQ9Y275 285 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 DTX4Q9Y2E6 619 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 RIPK3Q9Y572 518 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.44□□□□□ -1.54
HIF1A-209ENST00000556827 HS3ST3B1Q9Y662 390 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 RAD50Q92878 1312 aa5.44□□□□□ -1.54
HIF1A-209ENST00000556827 CEP290O15078 2479 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 BRCA2P51587 3418 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 MAST2Q6P0Q8 1798 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 TRBV5-3A0A0A0MS03 114 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CD8B2A6NJW9 211 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 EIF3FO00303 357 aaPredicted RBP5.43□□□□□ -1.54
HIF1A-209ENST00000556827 SYN3O14994 580 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 RNF113AO15541 343 aaKnown RBP5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CNOT3O75175 753 aaKnown RBP5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CRYABP02511 175 aaKnown RBP5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CBSLP0DN79 551 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CKMT1AP12532 417 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CCKBRP32239 447 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CBSP35520 551 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 STAT2P52630 851 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 ITGA7Q13683 1181 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 ALKBH1Q13686 389 aaKnown RBP5.43□□□□□ -1.54
HIF1A-209ENST00000556827 FBXO47Q5MNV8 452 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 CXCL17Q6UXB2 119 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 COLCA1Q6ZS62 124 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 B4GALNT4Q76KP1 1039 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 TLK2Q86UE8 772 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 SCN4BQ8IWT1 228 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 GMCL1P1Q8NEA9 526 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 HERVK_113Q902F9 699 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 FAM122AQ96E09 287 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 ZFYVE19Q96K21 471 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 ZSCAN31Q96LW9 406 aaPredicted RBP5.43□□□□□ -1.54
HIF1A-209ENST00000556827 ZNF304Q9HCX3 659 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 PAPOLBQ9NRJ5 636 aaKnown RBP5.43□□□□□ -1.54
HIF1A-209ENST00000556827 TMLHEQ9NVH6 421 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 PNMA2Q9UL42 364 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 DNAJC16Q9Y2G8 782 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 Q9Y3F1 56 aa5.43□□□□□ -1.54
HIF1A-209ENST00000556827 PTPRFP10586 1907 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 DPPA5A6NC42 116 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 TSPY2A6NKD2 308 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 KCNJ18B7U540 433 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 F8W810 466 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 RHODO00212 210 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 MSI1O43347 362 aaKnown RBP5.42□□□□□ -1.54
HIF1A-209ENST00000556827 TULP3O75386 442 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 PRDM1O75626 825 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 ARSAP15289 507 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 HOXB9P17482 250 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms