RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 MAGOHBQ96A72 148 aaKnown RBP17.51■□□□□ 0.39
SHMT2-225ENST00000556798 CENPTQ96BT3 561 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 COQ10AQ96MF6 247 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 LENG8Q96PV6 779 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-225ENST00000556798 EDEM2Q9BV94 578 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 C1QTNF7Q9BXJ2 289 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 HOMER3Q9NSC5 361 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 SHOC2Q9UQ13 582 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 DRG1Q9Y295 367 aaKnown RBP17.51■□□□□ 0.39
SHMT2-225ENST00000556798 ANKRD6Q9Y2G4 727 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 AAR2Q9Y312 384 aaKnown RBP17.51■□□□□ 0.39
SHMT2-225ENST00000556798 SPO11Q9Y5K1 396 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 LRP4O75096 1905 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 ARHGAP33O14559 1287 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 FPGTO14772 594 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 VILLO15195 856 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 PCCBP05166 539 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 ACTN2P35609 894 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 C21orf59P57076 290 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 LRRC14Q15048 493 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 SLC1A5Q15758 541 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 CDKN3Q16667 212 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 CYP1B1Q16678 543 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 LYSMD3Q7Z3D4 306 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 CREG2Q8IUH2 290 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 GPR161Q8N6U8 529 aaKnown RBP17.5■□□□□ 0.39
SHMT2-225ENST00000556798 MFSD2AQ8NA29 543 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 OR13H1Q8NG92 308 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 NUS1Q96E22 293 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 BMFQ96LC9 184 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 LYSMD1Q96S90 227 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 CD84Q9UIB8 345 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 ZNF711Q9Y462 761 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 SNX11Q9Y5W9 270 aa17.5■□□□□ 0.39
SHMT2-225ENST00000556798 ZNF106Q9H2Y7 1883 aaKnown RBP17.5■□□□□ 0.39
SHMT2-225ENST00000556798 GOLGA6L10A0A0M3HER8 536 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 A6NNZ2 444 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 TLR4O00206 839 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PSMD11O00231 422 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PHF2O75151 1096 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 EPOP01588 193 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 SYPP08247 313 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 THEGLP0DJG4 465 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 ZNF30P17039 623 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 HLA-DPA1P20036 260 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 RPL22P35268 128 aaKnown RBP17.49■□□□□ 0.39
SHMT2-225ENST00000556798 ADRA1AP35348 466 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 COILP38432 576 aaPredicted RBP17.49■□□□□ 0.39
SHMT2-225ENST00000556798 STC1P52823 247 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PTSQ03393 145 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 TRIP13Q15645 432 aaPredicted RBP17.49■□□□□ 0.39
SHMT2-225ENST00000556798 CCDC137Q6PK04 289 aaKnown RBP17.49■□□□□ 0.39
SHMT2-225ENST00000556798 KYAT3Q6YP21 454 aaKnown RBP17.49■□□□□ 0.39
SHMT2-225ENST00000556798 Q6ZVL8 140 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 ABI3BPQ7Z7G0 1075 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 KLHDC8BQ8IXV7 354 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 SLC22A18ASQ8N1D0 253 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PELI3Q8N2H9 469 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PDCD7Q8N8D1 485 aaKnown RBP17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PLA2G15Q8NCC3 412 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 DTD2Q96FN9 168 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 KLHDC7BQ96G42 594 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PPP1R2P1Q96PQ5 205 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 TBL1YQ9BQ87 522 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 ETNK1Q9HBU6 452 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 PAK5Q9P286 719 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 HS3ST3A1Q9Y663 406 aa17.49■□□□□ 0.39
SHMT2-225ENST00000556798 ASCC3Q8N3C0 2202 aaKnown RBP17.49■□□□□ 0.39
SHMT2-225ENST00000556798 GOLGA6CA6NDK9 693 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 GOLGA6BA6NDN3 693 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 PDE2AO00408 941 aaPredicted RBP17.48■□□□□ 0.39
SHMT2-225ENST00000556798 AURKAO14965 403 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 FGF1P05230 155 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 GOLGA6DP0CG33 693 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 CTSKP43235 329 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 VPS41P49754 854 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 ATXN3P54252 364 aaPredicted RBP17.48■□□□□ 0.39
SHMT2-225ENST00000556798 NXPH1P58417 271 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 AGERQ15109 404 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 PRAMEF14Q5SWL7 426 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 TPRG1LQ5T0D9 272 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 KCTD11Q693B1 232 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 Q6ZSR6 202 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 SPATS2Q86XZ4 545 aaKnown RBP17.48■□□□□ 0.39
SHMT2-225ENST00000556798 CBARPQ8N350 705 aaPredicted RBP17.48■□□□□ 0.39
SHMT2-225ENST00000556798 MINDY1Q8N5J2 469 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 BLOC1S5Q8TDH9 187 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 EID2BQ96D98 161 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 IL21RQ9HBE5 538 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 ZFYVE1Q9HBF4 777 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 MAGEE1Q9HCI5 957 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 RAB6BQ9NRW1 208 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 GOLGA6AQ9NYA3 693 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 DMXL1Q9Y485 3027 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 CABIN1Q9Y6J0 2220 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 CFAP54Q96N23 3096 aa17.48■□□□□ 0.39
SHMT2-225ENST00000556798 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-225ENST00000556798 K7ESM1 405 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 FDFT1P37268 417 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 PFN3P60673 137 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms