RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 PDGFRAP16234 1089 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 DESP17661 470 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 CASP14P31944 242 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 DGKEP52429 567 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 ADKP55263 362 aaKnown RBP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PITX1P78337 314 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 FMO1Q01740 532 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 SATB1Q01826 763 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PDCD1Q15116 288 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 LPAL2Q16609 132 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PREPLQ4J6C6 727 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PTPN20Q4JDL3 420 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 MPPE1Q53F39 396 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 TMEM196Q5HYL7 178 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 AGBL4Q5VU57 503 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 RAP1GAP2Q684P5 730 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 NUGGCQ68CJ6 796 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 ACAD10Q6JQN1 1059 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 KLHDC10Q6PID8 442 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 TRIM72Q6ZMU5 477 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 Q6ZS52 159 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 USP30Q70CQ3 517 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 APTXQ7Z2E3 356 aaKnown RBP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 IRF2BP2Q7Z5L9 587 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 TAC4Q86UU9 113 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 VPS36Q86VN1 386 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 CHSY1Q86X52 802 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF677Q86XU0 584 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 SPATS2Q86XZ4 545 aaKnown RBP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF354CQ86Y25 554 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 XYLT1Q86Y38 959 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 SFTPA1Q8IWL2 248 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF276Q8N554 614 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 ALLCQ8N6M5 410 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 EMC1Q8N766 993 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PRSS33Q8NF86 280 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 DQX1Q8TE96 717 aaKnown RBP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 UCMAQ8WVF2 138 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 RXFP2Q8WXD0 754 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 OTUB2Q96DC9 234 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 CFAP57Q96MR6 1250 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 WDR92Q96MX6 357 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 SERPINB11Q96P15 392 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PCDHB18PQ96TA0 734 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 TBCBQ99426 244 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 OSBPL6Q9BZF3 934 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 CIPCQ9C0C6 399 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PITHD1Q9GZP4 211 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 OR10A2Q9H208 303 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 DEF6Q9H4E7 631 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATXN3-237ENST00000556274 DNAI1Q9UI46 699 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 STAP1Q9ULZ2 295 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 PLA2G4CQ9UP65 541 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 VWA7Q9Y334 891 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 SNX10Q9Y5X0 201 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 R4GN57 208 aa4.79□□□□□ -1.64
ATXN3-237ENST00000556274 ANTXRLA6NF34 631 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 TMEM110-MUSTN1A8MSY1 372 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 KCNU1A8MYU2 1149 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 WASH3PC4AMC7 463 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 F5H5T6 163 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 K7EQS6 105 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 AKR1B10O60218 316 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 RTN2O75298 545 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 MOCS3O95396 460 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 LSM8O95777 96 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 F9P00740 461 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CALB1P05937 261 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 FYNP06241 537 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SP9P0CG40 484 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SLC2A3P11169 496 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 POLR2EP19388 210 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 TACR2P21452 398 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 GPD1P21695 349 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 HOXC13P31276 330 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SDC4P31431 198 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SLC6A4P31645 630 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CCR1P32246 355 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 OPRD1P41143 372 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 MATKP42679 507 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 TNFRSF4P43489 277 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 RPS9P46781 194 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CCR3P51677 355 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SCAND1P57086 179 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 RAC3P60763 192 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 RPS24P62847 133 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 NOMO3P69849 1222 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 ZBED6P86452 979 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 FAPQ12884 760 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 TBR1Q16650 682 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 RNF151Q2KHN1 245 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 C15orf59Q2T9L4 293 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 ARL13BQ3SXY8 428 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 ACCSLQ4AC99 568 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CT83Q5H943 113 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CCDC122Q5T0U0 273 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SPECC1LQ69YQ0 1117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms