RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TRIM4Q9C037 500 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DHX35Q9H5Z1 703 aaKnown RBP14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 LMBRD1Q9NUN5 540 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CHMP5Q9NZZ3 219 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NBPF19A0A087WUL8 3843 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NBASA2RRP1 2371 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 A0A1W2PQC6 194 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TMEM191CA6NGB0 347 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 EEF2KO00418 725 aaKnown RBP14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SOD1P00441 154 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CCNB1P14635 433 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 AK4P27144 223 aaPredicted RBP14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CD1CP29017 333 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 KCNC4Q03721 635 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 BCL2L1Q07817 233 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CLCA4Q14CN2 919 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ERMARDQ5T6L9 678 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 E4F1Q66K89 784 aaPredicted RBP14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 RCBTB1Q8NDN9 531 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NEK11Q8NG66 645 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TMEM159Q96B96 161 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SEMA3CQ99985 751 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SLC12A9Q9BXP2 914 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DPEP2Q9H4A9 486 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 WDR26Q9H7D7 661 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ETNK2Q9NVF9 386 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CWC15Q9P013 229 aaKnown RBP14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PCSK1NQ9UHG2 260 aa14.37□□□□□ -0.11
CHMP4BP1-201ENST00000556017 IGHV5-10-1A0A0J9YXX1 117 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 A0A0U1RQS6 177 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PPM1DO15297 605 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SUV39H1O43463 412 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CPNE6O95741 557 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 FGF3P11487 239 aaPredicted RBP14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MYCLP1P12525 358 aaPredicted RBP14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TCF4P15884 667 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MIPP30301 263 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CSF2RBP32927 897 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CSRP3P50461 194 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SCNN1BP51168 640 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MAPK10P53779 464 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 IHHQ14623 411 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 RFTN1Q14699 578 aaPredicted RBP14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CLEC17AQ6ZS10 378 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 RFLNAQ6ZTI6 216 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PRICKLE2Q7Z3G6 844 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 HSD11B1LQ7Z5J1 315 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 HEATR4Q86WZ0 1026 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NAGSQ8N159 534 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CMKLR1Q99788 373 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CINPQ9BW66 212 aaPredicted RBP14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 B3GNT4Q9C0J1 378 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SEPT11Q9NVA2 429 aaKnown RBP14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TAAR2Q9P1P5 351 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 IL17BQ9UHF5 180 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PLEKHM1Q9Y4G2 1056 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PCDHGC4Q9Y5F7 938 aa14.36□□□□□ -0.11
CHMP4BP1-201ENST00000556017 LRRK2Q5S007 2527 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 EIF3CLB5ME19 914 aaKnown RBP14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DFFAO00273 331 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ARHGAP6O43182 974 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TEX33O43247 280 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 LRCH4O75427 683 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ECEL1O95672 775 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TNFAIP3P21580 790 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 KELP23276 732 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PSMA2P25787 234 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 IL1R2P27930 398 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ETV3P41162 512 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 POLD2P49005 469 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 HCAR3P49019 387 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 AP1S1P61966 158 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TRAF2Q12933 501 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ACOX1Q15067 660 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CFAP58Q5T655 872 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PHF19Q5T6S3 580 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 XKR5Q6UX68 686 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DTD2Q96FN9 168 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SCARF2Q96GP6 870 aaPredicted RBP14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SMIM14Q96QK8 99 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 EIF3CQ99613 913 aaKnown RBP14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CARS2Q9HA77 564 aaKnown RBP14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TRNAU1APQ9NX07 287 aaKnown RBP14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TMEM9Q9P0T7 183 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SLC17A4Q9Y2C5 497 aa14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PCYT1BQ9Y5K3 369 aaPredicted RBP14.35□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ANKRD62A6NC57 917 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NPIPB15A6NHN6 443 aaPredicted RBP14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MAFKO60675 156 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ATP1A3P13637 1013 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 POLR2LP62875 67 aaKnown RBP14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CDK3Q00526 305 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CTBSQ01459 385 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 UBXN1Q04323 297 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SQSTM1Q13501 440 aa14.34□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ARHGEF7Q14155 803 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms