RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 PCCBP05166 539 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 IVLP07476 585 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 CCNB1P14635 433 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF30P17039 623 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 GM2AP17900 193 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 AMPD1P23109 780 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 IL4RP24394 825 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 IL1R2P27930 398 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 PBX1P40424 430 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 PDX1P52945 283 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 RPL26P61254 145 aaKnown RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 TPM4P67936 248 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 CCL7P80098 99 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 B4GALNT1Q00973 533 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 CFHR1Q03591 330 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ARHGEF7Q14155 803 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF235Q14590 738 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ACOX1Q15067 660 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 HADHQ16836 314 aaKnown RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 TAF1BQ53T94 588 aaPredicted RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ARMC12Q5T9G4 340 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 HGSNATQ68CP4 663 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ALG1LQ6GMV1 187 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 TIGD7Q6NT04 549 aaPredicted RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ARHGAP36Q6ZRI8 547 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 TECPR1Q7Z6L1 1165 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF605Q86T29 641 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 MAP7D3Q8IWC1 876 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 PAF1Q8N7H5 531 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 PLA2G15Q8NCC3 412 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 OR1E3Q8WZA6 343 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 TTC9Q92623 222 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 DTD2Q96FN9 168 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 SCARF2Q96GP6 870 aaPredicted RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 TSGA13Q96PP4 275 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 CCNL2Q96S94 520 aaPredicted RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 FUCA2Q9BTY2 467 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 DPEP2Q9H4A9 486 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 FGF22Q9HCT0 170 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 AKAP7Q9P0M2 348 aaPredicted RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 LRIT1Q9P2V4 623 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 ATXN7L1Q9ULK2 861 aaPredicted RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 CAPN11Q9UMQ6 739 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 RPL26L1Q9UNX3 145 aaKnown RBP7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 SLC17A4Q9Y2C5 497 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 PCDHGC4Q9Y5F7 938 aa7.79□□□□□ -1.16
PTCSC3-201ENST00000556013 PRSS38A1L453 326 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 RGSL1A5PLK6 1076 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 HGSO14964 777 aaPredicted RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 MATN3O15232 486 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 C1QL1O75973 258 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CPNE6O95741 557 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CPP00450 1065 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CYP1A2P05177 515 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 FGF1P05230 155 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 RPLP0P05388 317 aaKnown RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CEACAM5P06731 702 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CELA2BP08218 269 aaPredicted RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 SKILP12757 684 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 MX2P20592 715 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CCNCP24863 283 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 HNRNPH3P31942 346 aaKnown RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 UGT1A5P35504 534 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 MMP13P45452 471 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ZBED6P86452 979 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CDK3Q00526 305 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 SLC25A11Q02978 314 aaKnown RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ILF3Q12906 894 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 TRA2AQ13595 282 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 PAFAH1B3Q15102 231 aaKnown RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 PDK2Q15119 407 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CNGA3Q16281 694 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CCDC122Q5T0U0 273 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ARHGAP40Q5TG30 622 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 E4F1Q66K89 784 aaPredicted RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ALKBH5Q6P6C2 394 aaKnown RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 PCSK4Q6UW60 755 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CCDC81Q6ZN84 652 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 USP45Q70EL2 814 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF765Q7L2R6 523 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF438Q7Z4V0 828 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 SPRED1Q7Z699 444 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 PIM3Q86V86 326 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 VSIG1Q86XK7 387 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 NRSN1Q8IZ57 195 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ZNF843Q8N446 348 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 ATPAF2Q8N5M1 289 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 KYQ8NBH2 561 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 PIH1D2Q8WWB5 315 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 MAML1Q92585 1016 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 NUS1Q96E22 293 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 PDXPQ96GD0 296 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 NAF1Q96HR8 494 aaKnown RBP7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 NSMCE3Q96MG7 304 aa7.78□□□□□ -1.16
PTCSC3-201ENST00000556013 LYSMD1Q96S90 227 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms