RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 C3orf20Q8ND61 904 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 ZNF564Q8TBZ8 553 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-212ENST00000555231 GPBAR1Q8TDU6 330 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 ART4Q93070 314 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 ECHDC3Q96DC8 303 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 MCEEQ96PE7 176 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 CINPQ9BW66 212 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-212ENST00000555231 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 ADNPQ9H2P0 1102 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 FAM207AQ9NSI2 230 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-212ENST00000555231 SEPT11Q9NVA2 429 aaKnown RBP13.13□□□□□ -0.31
XRCC3-212ENST00000555231 TAAR2Q9P1P5 351 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 B4GALT6Q9UBX8 382 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 B3GALT1Q9Y5Z6 326 aa13.13□□□□□ -0.31
XRCC3-212ENST00000555231 COL12A1Q99715 3063 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 TCRBV5S1A1TA0A578 114 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 ARHGAP42A6NI28 874 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 PDE2AO00408 941 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-212ENST00000555231 HGSO14964 777 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-212ENST00000555231 PPM1DO15297 605 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 CALB1P05937 261 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 CEACAM5P06731 702 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 MYCLP1P12525 358 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-212ENST00000555231 POLD2P49005 469 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 SCNN1BP51168 640 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 NDST2P52849 883 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 LIMK2P53671 638 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 ILF3Q12906 894 aaKnown RBP eCLIP13.12□□□□□ -0.31
XRCC3-212ENST00000555231 CA9Q16790 459 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 DNAJC24Q6P3W2 148 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 HEATR4Q86WZ0 1026 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 PHF13Q86YI8 300 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-212ENST00000555231 LURAP1LQ8IV03 231 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 CACNA2D3Q8IZS8 1091 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 NAGSQ8N159 534 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 NUS1Q96E22 293 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 GSDMCQ9BYG8 508 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 SP110Q9HB58 689 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 PHPT1Q9NRX4 125 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-212ENST00000555231 OCIAD1Q9NX40 245 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 PLEKHM1Q9Y4G2 1056 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 PCDHGA3Q9Y5H0 932 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 ST14Q9Y5Y6 855 aa13.12□□□□□ -0.31
XRCC3-212ENST00000555231 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 GOLGA6BA6NDN3 693 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 DFFAO00273 331 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 EEF2KO00418 725 aaKnown RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 RAD1O60671 282 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 ERCC5P28715 1186 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 CSF2RBP32927 897 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 UBE2HP62256 183 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 CTBSQ01459 385 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 OGDHQ02218 1023 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 UBAP2LQ14157 1087 aaKnown RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 NR1D2Q14995 579 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 CNGA3Q16281 694 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 ZNF761Q86XN6 746 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 ARHGAP12Q8IWW6 846 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 FRMD8Q9BZ67 464 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 CDH19Q9H159 772 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 DHX35Q9H5Z1 703 aaKnown RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 ZNF71Q9NQZ8 489 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-212ENST00000555231 SLC39A1Q9NY26 324 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 AP4E1Q9UPM8 1137 aa13.11□□□□□ -0.31
XRCC3-212ENST00000555231 TRBV23OR9-2A0A075B6M9 112 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 IGHV1OR21-1A0A087WYE8 117 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 ANKRD62A6NC57 917 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 NKX2-8O15522 239 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 DUX1O43812 170 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 THRAP10827 490 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 EEF1GP26641 437 aaKnown RBP13.1□□□□□ -0.31
XRCC3-212ENST00000555231 CSTF2P33240 577 aaKnown RBP eCLIP13.1□□□□□ -0.31
XRCC3-212ENST00000555231 ETV3P41162 512 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 CCR10P46092 362 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 AIF1P55008 147 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 TRA2AQ13595 282 aaKnown RBP eCLIP13.1□□□□□ -0.31
XRCC3-212ENST00000555231 PTPRRQ15256 657 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
XRCC3-212ENST00000555231 PPP1R15BQ5SWA1 713 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 ANKS6Q68DC2 871 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 DCUN1D2Q6PH85 259 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 DOK6Q6PKX4 331 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 FAM129CQ86XR2 697 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 TP53INP2Q8IXH6 220 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 NRSN1Q8IZ57 195 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 AGBL5Q8NDL9 886 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 PDCD6IPQ8WUM4 868 aaKnown RBP13.1□□□□□ -0.31
XRCC3-212ENST00000555231 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
XRCC3-212ENST00000555231 CNPY3Q9BT09 278 aa13.1□□□□□ -0.31
XRCC3-212ENST00000555231 TEX101Q9BY14 249 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms