RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 NDST3O95803 873 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 MT-CYBP00156 380 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-218ENST00000555213 RETP07949 1114 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 MMP2P08253 660 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 ELFN1P0C7U0 828 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 TPSB2P20231 275 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 CD27P26842 260 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 VIPR1P32241 457 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 FDFT1P37268 417 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PTGER3P43115 390 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 LMAN1P49257 510 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PMS2P54278 862 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 WNT3AP56704 352 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PPP2CBP62714 309 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PPP2CAP67775 309 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 CDK18Q07002 472 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 SGCGQ13326 291 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 ARHGEF7Q14155 803 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 FASTKD3Q14CZ7 662 aaKnown RBP10.94□□□□□ -0.66
SHMT2-218ENST00000555213 TPSAB1Q15661 275 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 DPPA4Q7L190 304 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 ZSWIM9Q86XI8 627 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 SYT12Q8IV01 421 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 SPATA22Q8NHS9 363 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PIGKQ92643 395 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 VOPP1Q96AW1 172 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 TADA1Q96BN2 335 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 BIRC7Q96CA5 298 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 OXNAD1Q96HP4 312 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-218ENST00000555213 MCCC1Q96RQ3 725 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-218ENST00000555213 WRAP53Q9BUR4 548 aaKnown RBP10.94□□□□□ -0.66
SHMT2-218ENST00000555213 MIR1-1HGQ9H1L0 117 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 LRRC40Q9H9A6 602 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 VIPAS39Q9H9C1 493 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PLAC1Q9HBJ0 212 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 UBP1Q9NZI7 540 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 FANCMQ8IYD8 2048 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 A0A0J9YYE9 177 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 ERI2A8K979 691 aaKnown RBP10.93□□□□□ -0.66
SHMT2-218ENST00000555213 PRR5-ARHGAP8B1AHC4 643 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SMAPO00193 183 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 LATO43561 262 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 LZTS3O60299 673 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-218ENST00000555213 TM7SF2O76062 418 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SUN1O94901 812 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 EPOP01588 193 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 TRBC1P01850 177 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 PRKCGP05129 697 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 FGF1P05230 155 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 IGHV4-34P06331 123 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 ZNF30P17039 623 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 HLA-DPA1P20036 260 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 ITPKAP23677 461 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 MAT2AP31153 395 aaKnown RBP10.93□□□□□ -0.66
SHMT2-218ENST00000555213 AKT2P31751 481 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 MPLP40238 635 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 MAGEA4P43358 317 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 BASP1P80723 227 aaKnown RBP10.93□□□□□ -0.66
SHMT2-218ENST00000555213 OLIG2Q13516 323 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 GALNT3Q14435 633 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SPARCL1Q14515 664 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 TEAD4Q15561 434 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 KYNUQ16719 465 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 TMEM52BQ4KMG9 183 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 TMEM259Q4ZIN3 620 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SEL1L3Q68CR1 1132 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 NAPEPLDQ6IQ20 393 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 KDELC2Q7Z4H8 507 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SLC41A1Q8IVJ1 513 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SUMF1Q8NBK3 374 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 CEP76Q8TAP6 659 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 PIH1D2Q8WWB5 315 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SKA1Q96BD8 255 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 ZBTB9Q96C00 473 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SCRN2Q96FV2 425 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 SIGLEC10Q96LC7 697 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 ZIM3Q96PE6 472 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 FICDQ9BVA6 458 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 NINJ2Q9NZG7 142 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 B4GALT6Q9UBX8 382 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 MTRF1LQ9UGC7 380 aaKnown RBP10.93□□□□□ -0.66
SHMT2-218ENST00000555213 EIF2B4Q9UI10 523 aaKnown RBP10.93□□□□□ -0.66
SHMT2-218ENST00000555213 GGT7Q9UJ14 662 aa10.93□□□□□ -0.66
SHMT2-218ENST00000555213 EML5Q05BV3 1969 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 ATXN2Q99700 1313 aaKnown RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 A0A1B0GTW7 788 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 A0A1W2PPC4 97 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 IGLON5A6NGN9 336 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 NPIPB15A6NHN6 443 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 ANKRD66B4E2M5 251 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 PRAMEF26H0Y7S4 382 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 PSMD11O00231 422 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 SPINT1O43278 529 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 RIPK2O43353 540 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 FOXD2O60548 495 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 MMP20O60882 483 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 TTC4O95801 387 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 SYF2O95926 243 aaKnown RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 APRTP07741 180 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms