RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PNPLA8Q9NP80 782 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 CISHQ9NSE2 258 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 OSER1Q9NX31 292 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 RAB20Q9NX57 234 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 ARMCX3Q9UH62 379 aaPredicted RBP4.35□□□□□ -1.71
VTI1B-203ENST00000554636 HOOK1Q9UJC3 728 aaKnown RBP4.35□□□□□ -1.71
VTI1B-203ENST00000554636 SCML2Q9UQR0 700 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 RUVBL1Q9Y265 456 aaKnown RBP4.35□□□□□ -1.71
VTI1B-203ENST00000554636 COQ4Q9Y3A0 265 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 HS3ST4Q9Y661 456 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 DMXL1Q9Y485 3027 aa4.35□□□□□ -1.71
VTI1B-203ENST00000554636 SPTBN4Q9H254 2564 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 ANTXRLA6NF34 631 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 DRGXA6NNA5 263 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 MDM4O15151 490 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 STX10O60499 249 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 TLR5O60602 858 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 NFATC1O95644 943 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 TBX18O95935 607 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 FPR1P21462 350 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 DRD1P21728 446 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 HOXA6P31267 233 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 PPP1R2P41236 205 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CXCL12P48061 93 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 FMO5P49326 533 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF132P52740 706 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 STX17P56962 302 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 UBE2HP62256 183 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 GRSF1Q12849 480 aaKnown RBP eCLIP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 LRMPQ12912 555 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 MALLQ13021 153 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 SRSF5Q13243 272 aaKnown RBP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 STIM1Q13586 685 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 TP53BP2Q13625 1128 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 GOLGA7BQ2TAP0 167 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 BEAN1Q3B7T3 259 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 RAB41Q5JT25 222 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 HECTD3Q5T447 861 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 FAM102AQ5T9C2 384 aaPredicted RBP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 RNF219Q5W0B1 726 aaPredicted RBP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 PCSK4Q6UW60 755 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 BHLHA9Q7RTU4 235 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CCDC186Q7Z3E2 898 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF572Q7Z3I7 529 aaPredicted RBP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 SCD5Q86SK9 330 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 PIGZQ86VD9 579 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 DDX42Q86XP3 938 aaKnown RBP eCLIP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 SFTPA1Q8IWL2 248 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 BBS7Q8IWZ6 715 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 TTC39CQ8N584 583 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 TRIML1Q8N9V2 468 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CCDC150Q8NCX0 1101 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 LMO3Q8TAP4 145 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 KAT5Q92993 513 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CD101Q93033 1021 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 RAB24Q969Q5 203 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 JAKMIP2Q96AA8 810 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 ZG16BQ96DA0 208 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 MYEOVQ96EZ4 313 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CYFIP2Q96F07 1278 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 P2RY11Q96G91 374 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 MED15Q96RN5 788 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 P2RY13Q9BPV8 354 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 MRI1Q9BV20 369 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 DUSP16Q9BY84 665 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 LINC00597Q9H2U6 94 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 FBXO44Q9H4M3 255 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 FAM124BQ9H5Z6 455 aaPredicted RBP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 METTL14Q9HCE5 456 aaKnown RBP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 LANCL2Q9NS86 450 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CHMP5Q9NZZ3 219 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CFAP97Q9P2B7 532 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 CHORDC1Q9UHD1 332 aaPredicted RBP4.34□□□□□ -1.71
VTI1B-203ENST00000554636 SCOCQ9UIL1 159 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 ACTL7AQ9Y615 435 aa4.34□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF292O60281 2723 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 E2F8A0AVK6 867 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 BICDL2A1A5D9 508 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 GRID2IPA4D2P6 1211 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 K7EQS6 105 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 TULP2O00295 520 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 O00370 1275 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 SLC9A3R1O14745 358 aaPredicted RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 XPO1O14980 1071 aaKnown RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 P4HA2O15460 535 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 HOXC11O43248 304 aaPredicted RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 B3GALT2O43825 422 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 MT-CO1P00395 513 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 IRF1P10914 325 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 RARGP13631 454 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 ALOX15P16050 662 aaPredicted RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 TRIM21P19474 475 aaKnown RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 BMP5P22003 454 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 TGM1P22735 817 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 SLC6A2P23975 617 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 TBXAS1P24557 533 aaPredicted RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 EIF2DP41214 584 aaKnown RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 BCAT1P54687 386 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms