RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ASPRV1Q53RT3 343 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 C1orf189Q5VU69 101 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PPP2R2DQ66LE6 453 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 WDR93Q6P2C0 686 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 DENND1BQ6P3S1 775 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ADAMTS19Q8TE59 1207 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 LRRC4BQ9NT99 713 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 HOXC10Q9NYD6 342 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RDH8Q9NYR8 311 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FTSJ1Q9UET6 329 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ADGRG1Q9Y653 693 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MYO5BQ9ULV0 1848 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 LYPLA1O75608 230 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RB1P06400 928 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PRLRP16471 622 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GPD1P21695 349 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGDIBP52566 201 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 IFI35P80217 286 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RESTQ13127 1097 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC137Q6PK04 289 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ATP8B4Q8TF62 1192 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC107Q8WV48 283 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RSC1A1Q92681 617 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL15Q96M94 604 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PARK7Q99497 189 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM62Q9BVG3 475 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SMG5Q9UPR3 1016 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 A0A0J9YVX5 310 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CD3EAPO15446 510 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PRICKLE3O43900 615 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 HCN1O60741 890 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 LYNP07948 512 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC166P0CW27 439 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SLC26A5P58743 744 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ADIGQ0VDE8 80 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 KCNH2Q12809 1159 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FBXO33Q7Z6M2 555 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 AURKBQ96GD4 344 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 JMJD4Q9H9V9 463 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM105AQ9NUU6 356 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM153AQ9UHL3 310 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RTN3O95197 1032 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 IGKV5-2P06315 115 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FSHRP23945 695 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 IL12BP29460 328 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 IL12RB1P42701 662 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RAB28P51157 221 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL26Q53HC5 615 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 C3orf38Q5JPI3 329 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TCHHL1Q5QJ38 904 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SCUBE3Q8IX30 993 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RLN3Q8WXF3 142 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 KCTD14Q9BQ13 255 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL4Q9BYD3 311 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NARFLQ9H6Q4 476 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NKX1-2Q9UD57 310 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GRIN2AQ12879 1464 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CARMIL3Q8ND23 1372 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CLPXO76031 633 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CD40LGP29965 261 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CCND3P30281 292 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PSMD5Q16401 504 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 C16orf89Q6UX73 402 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SLC41A1Q8IVJ1 513 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SCUBE1Q8IWY4 988 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GNB4Q9HAV0 340 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RBM22Q9NW64 420 aaKnown RBP eCLIP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CDY2AQ9Y6F7 541 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ANKARQ7Z5J8 1434 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 JUNP05412 331 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GNPDA1P46926 289 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 OAZ1P54368 228 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZBED6P86452 979 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SQSTM1Q13501 440 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SLC39A14Q15043 492 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SF1Q15637 639 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ANKDD1AQ495B1 522 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RAB11FIP2Q7L804 512 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 EID3Q8N140 333 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TSTD1Q8NFU3 115 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 OR7D4Q8NG98 312 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 DNASE1L2Q92874 299 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SKA1Q96BD8 255 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GIN1Q9NXP7 522 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 DNAJB4Q9UDY4 337 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ALG6Q9Y672 507 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 WNT6Q9Y6F9 365 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NBASA2RRP1 2371 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM186AA6NE01 2351 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PBRM1Q86U86 1689 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 STX16-NPEPL1H3BU86 382 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 STX16O14662 325 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZNHIT1O43257 154 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TRAPPC3O43617 180 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PSME3P61289 254 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GNB2P62879 340 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PEX6Q13608 980 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SWI5Q1ZZU3 235 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 IER5Q5VY09 327 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms