RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 FGF1P05230 155 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 HOXC4P09017 264 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 FGF3P11487 239 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 HTR1BP28222 390 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 PRKCIP41743 596 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 MAPK10P53779 464 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 MAZP56270 477 aaKnown RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 OR1D5P58170 312 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 RPL7AP62424 266 aaKnown RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 OGDHQ02218 1023 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 TLE1Q04724 770 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 RAD51Q06609 339 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 NR1D2Q14995 579 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 FIGNQ5HY92 759 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 EFHC2Q5JST6 749 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 MANEAQ5SRI9 462 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 PPP1R15BQ5SWA1 713 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 AFMIDQ63HM1 303 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 SPECC1LQ69YQ0 1117 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 SCYL2Q6P3W7 929 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 DCUN1D2Q6PH85 259 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 ZNF571Q7Z3V5 609 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 TAF8Q7Z7C8 310 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 SLFN11Q7Z7L1 901 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 ARHGAP12Q8IWW6 846 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 CBARPQ8N350 705 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 TSEN2Q8NCE0 465 aaKnown RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 OR56A4Q8NGH8 313 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 GPBAR1Q8TDU6 330 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 PATE1Q8WXA2 126 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 JPH3Q8WXH2 748 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 NKD1Q969G9 470 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 ZNF641Q96N77 438 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 MCEEQ96PE7 176 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 NUDT22Q9BRQ3 303 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 GEMIN8Q9NWZ8 242 aaKnown RBP11.59□□□□□ -0.55
TUBB3-204ENST00000554116 FZD10Q9ULW2 581 aa11.59□□□□□ -0.55
TUBB3-204ENST00000554116 RP1L1Q8IWN7 2480 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CLEC18AA5D8T8 446 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CFAP69A5D8W1 941 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 B4DGG1 531 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 TRAFD1O14545 582 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 TNFRSF10CO14798 259 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 NUDT21O43809 227 aaKnown RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 PRAMEF11O60813 436 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 FTLP02792 175 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CEACAM5P06731 702 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 SKILP12757 684 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 DESP17661 470 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CD1CP29017 333 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 PBX1P40424 430 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CSNK1DP48730 415 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 ZNF143P52747 638 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 UBAP2LQ14157 1087 aaKnown RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CA9Q16790 459 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 PARP15Q460N3 678 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 E4F1Q66K89 784 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 BRAT1Q6PJG6 821 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CLEC18BQ6UXF7 455 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 ARHGAP36Q6ZRI8 547 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 SRLQ86TD4 932 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 DNAAF5Q86Y56 855 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 TP53INP2Q8IXH6 220 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 ARFGAP1Q8N6T3 406 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 ZSCAN1Q8NBB4 408 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CLEC18CQ8NCF0 446 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 RCBTB1Q8NDN9 531 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CPLX3Q8WVH0 158 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 TMEM159Q96B96 161 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CELF6Q96J87 481 aaKnown RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 SPRY4Q9C004 299 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 B3GNT4Q9C0J1 378 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 SLC39A8Q9C0K1 460 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 SLC25A18Q9H1K4 315 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 CYP4F12Q9HCS2 524 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 PARVAQ9NVD7 372 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 SEPT10Q9P0V9 454 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 IFNKQ9P0W0 207 aa11.58□□□□□ -0.56
TUBB3-204ENST00000554116 UBA2Q9UBT2 640 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-204ENST00000554116 IGHV5-10-1A0A0J9YXX1 117 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 A0A1W2PQJ5 194 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 TTC24A2A3L6 582 aaPredicted RBP11.57□□□□□ -0.56
TUBB3-204ENST00000554116 A8MX80 341 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 DDX3XO00571 662 aaKnown RBP eCLIP11.57□□□□□ -0.56
TUBB3-204ENST00000554116 PPM1DO15297 605 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 CREB3O43889 395 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 GZMAP12544 262 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 MAMLD1Q13495 774 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 PTPRRQ15256 657 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 PHF19Q5T6S3 580 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 PNCKQ6P2M8 343 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 CYP4V2Q6ZWL3 525 aaPredicted RBP11.57□□□□□ -0.56
TUBB3-204ENST00000554116 ZNF354CQ86Y25 554 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 COQ10AQ96MF6 247 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 CMKLR1Q99788 373 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 CNPY3Q9BT09 278 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 DPEP2Q9H4A9 486 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 GPATCH2LQ9NWQ4 482 aa11.57□□□□□ -0.56
TUBB3-204ENST00000554116 TMEM9Q9P0T7 183 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms