RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SLC25A41Q8N5S1 370 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 UHMK1Q8TAS1 419 aaKnown RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 RAB3IL1Q8TBN0 382 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 OR8D1Q8WZ84 308 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 HLA-CQ95604 372 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 HDAC10Q969S8 669 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 EID2BQ96D98 161 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 APOPT1Q96IL0 206 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 VPS39Q96JC1 886 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 ZFYVE19Q96K21 471 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 EXOC2Q96KP1 924 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 FAM129BQ96TA1 746 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 KXD1Q9BQD3 176 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 TRIM56Q9BRZ2 755 aaKnown RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 FAM126AQ9BYI3 521 aaPredicted RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 TM6SF2Q9BZW4 377 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 BRD9Q9H8M2 597 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 ZFYVE1Q9HBF4 777 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CD248Q9HCU0 757 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 LATS2Q9NRM7 1088 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CTNNAL1Q9UBT7 734 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 IL36AQ9UHA7 158 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 DCDC2Q9UHG0 476 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 GGT7Q9UJ14 662 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CDH22Q9UJ99 828 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 HCN2Q9UL51 889 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 SCML1Q9UN30 329 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 PKP3Q9Y446 797 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 TICRRQ7Z2Z1 1910 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 MYO10Q9HD67 2058 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 TMEM120BA0PK00 339 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 TTC34A8MYJ7 566 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 F5H423 210 aaPredicted RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 KLF11O14901 512 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 TRIM24O15164 1050 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 BIRC5O15392 142 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 STX7O15400 261 aaKnown RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 ASMTLO95671 621 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 KRT4P19013 534 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 TEAD1P28347 426 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 HNF1BP35680 557 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 CD151P48509 253 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 SERPINB8P50452 374 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 ARSDP51689 593 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 CACNG1Q06432 222 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 MESP2Q0VG99 397 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 MTM1Q13496 603 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 MPP2Q14168 576 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 GALNT3Q14435 633 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 ITIH4Q14624 930 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 EFTUD2Q15029 972 aaKnown RBP eCLIP10.88□□□□□ -0.677e-12■■□□□ 13
PABPN1-203ENST00000553960 TMED2Q15363 201 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 FAM182AQ5T1J6 154 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 FAM46CQ5VWP2 391 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 KCTD16Q68DU8 428 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 DPPA4Q7L190 304 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 STRA8Q7Z7C7 330 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 RASSF3Q86WH2 238 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 ZSWIM9Q86XI8 627 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 SRRM1Q8IYB3 904 aaKnown RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 UNC5BQ8IZJ1 945 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 SYNPOQ8N3V7 929 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 NAT16Q8N8M0 369 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 LPCAT1Q8NF37 534 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 BLOC1S5Q8TDH9 187 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 CSGALNACT1Q8TDX6 532 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 PPP1R16AQ96I34 528 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 DNAJC1Q96KC8 554 aaKnown RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 UBXN10Q96LJ8 280 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 TBATAQ96M53 351 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 AGAP2Q99490 1192 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 CDX2Q99626 313 aaPredicted RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 P2RY13Q9BPV8 354 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 RPP25Q9BUL9 199 aaKnown RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 CIPCQ9C0C6 399 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 RSPH9Q9H1X1 276 aaPredicted RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 CHRDQ9H2X0 955 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 KCNK12Q9HB15 430 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 PIH1D1Q9NWS0 290 aaKnown RBP10.88□□□□□ -0.67
PABPN1-203ENST00000553960 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 SLC2A6Q9UGQ3 507 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 GRID1Q9ULK0 1009 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 PLLPQ9Y342 182 aa10.88□□□□□ -0.67
PABPN1-203ENST00000553960 PLXNA2O75051 1894 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 TTC24A2A3L6 582 aaPredicted RBP10.87□□□□□ -0.67
PABPN1-203ENST00000553960 CCDC162PA2VCL2 907 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 TBC1D3BA6NDS4 549 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 C2CD4DB7Z1M9 353 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 SPECC1L-ADORA2AF8WAN1 911 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 K7EQS6 105 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 EIF3FO00303 357 aaPredicted RBP10.87□□□□□ -0.67
PABPN1-203ENST00000553960 GAPDHSO14556 408 aaPredicted RBP10.87□□□□□ -0.67
PABPN1-203ENST00000553960 LEFTY1O75610 366 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 APOA4P06727 396 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 CTSLP07711 333 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 TIMP2P16035 220 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 VIPR1P32241 457 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 MMP12P39900 470 aa10.87□□□□□ -0.67
PABPN1-203ENST00000553960 SKIV2L2P42285 1042 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms