RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TTLL2Q9BWV7 592 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 GSTO2Q9H4Y5 243 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 PDFQ9HBH1 243 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 SYTL2Q9HCH5 934 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 CNOT11Q9UKZ1 510 aaKnown RBP12.93□□□□□ -0.34
SHMT2-205ENST00000553474 PRG3Q9Y2Y8 225 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-205ENST00000553474 CEP290O15078 2479 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 BPTFQ12830 3046 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 BBIP1A8MTZ0 92 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PSMD12O00232 456 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 HOXA2O43364 376 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 DENRO43583 198 aaKnown RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ALDH2P05091 517 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ENO3P13929 434 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SYN1P17600 705 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 VCLP18206 1134 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TACR2P21452 398 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PEX2P28328 305 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ALDH1A3P47895 512 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 GPR15P49685 360 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TRAP1Q12931 704 aaKnown RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 GRM2Q14416 872 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ZNF789Q5FWF6 425 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 FAM171A1Q5VUB5 890 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SDHAF4Q5VUM1 108 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TMEM198Q66K66 360 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 KLHDC10Q6PID8 442 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ANKS3Q6ZW76 656 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 MIB1Q86YT6 1006 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ST13P4Q8IZP2 240 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CLYBLQ8N0X4 340 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PGBD5Q8N414 524 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SPATA6LQ8N4H0 392 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PDZD8Q8NEN9 1154 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 LINC01599Q8WXQ3 324 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SGF29Q96ES7 293 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PPP1R36Q96LQ0 422 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 LRGUKQ96M69 825 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PSKH2Q96QS6 385 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CYP2S1Q96SQ9 504 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 MGME1Q9BQP7 344 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TFB2MQ9H5Q4 396 aaKnown RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SEPT3Q9UH03 358 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 RAB26Q9ULW5 256 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TRAF6Q9Y4K3 522 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 H0YJX3 145 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PFDN6O15212 129 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TBC1D4O60343 1298 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TLR5O60602 858 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SORBS2O94875 1100 aaKnown RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 FESP07332 822 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SNRPB2P08579 225 aaKnown RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CD1DP15813 335 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ZNF37AP17032 561 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CD9P21926 228 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ARSDP51689 593 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 STC1P52823 247 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 PGGT1BP53609 377 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CDKN2DP55273 166 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CDH4P55283 916 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SH3BGRP55822 239 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 STX1BP61266 288 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CEACAM7Q14002 265 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 FASTKQ14296 549 aaKnown RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 MBTPS1Q14703 1052 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 MMEL1Q495T6 779 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SPATS1Q496A3 300 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 LARP4Q71RC2 724 aaKnown RBP eCLIP12.92□□□□□ -0.341e-7■■□□□ 12.3
SHMT2-205ENST00000553474 DEFB128Q7Z7B8 93 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ATAD1Q8NBU5 361 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 OR4L1Q8NH43 312 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SHKBP1Q8TBC3 707 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ANKRD49Q8WVL7 239 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 ROPN1LQ96C74 230 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 MOCOSQ96EN8 888 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TMEM175Q9BSA9 504 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 MRPL9Q9BYD2 267 aaKnown RBP12.92□□□□□ -0.34
SHMT2-205ENST00000553474 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 SPAG4Q9NPE6 437 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 CATSPERZQ9NTU4 200 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 TMCO1Q9UM00 188 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 DTNAQ9Y4J8 743 aa12.92□□□□□ -0.34
SHMT2-205ENST00000553474 NEMP2A6NFY4 417 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 TMEM233B4DJY2 109 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 ACOT8O14734 319 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 AHCYL1O43865 530 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 VPS4BO75351 444 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 SUPT7LO94864 414 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 GOT2P00505 430 aaKnown RBP12.91□□□□□ -0.34
SHMT2-205ENST00000553474 KCNA5P22460 613 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 ITGB8P26012 769 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 ETFBP38117 255 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 SLC11A2P49281 568 aa12.91□□□□□ -0.34
SHMT2-205ENST00000553474 ATP6V0D1P61421 351 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms