RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PYCARD-AS1I3L0S3 204 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 J3KR12 359 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PRPSAP2O60256 369 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PRMT3O60678 531 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 RECQL5O94762 991 aaPredicted RBP9.95□□□□□ -0.82
ACTN1-208ENST00000553370 LIPCP11150 499 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 GLB1P16278 677 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 TNFAIP3P21580 790 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PAPOLAP51003 745 aaKnown RBP9.95□□□□□ -0.82
ACTN1-208ENST00000553370 SCNN1BP51168 640 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 RENBPP51606 427 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PDX1P52945 283 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 RPL7AP62424 266 aaKnown RBP9.95□□□□□ -0.82
ACTN1-208ENST00000553370 ILF3Q12906 894 aaKnown RBP eCLIP9.95□□□□□ -0.82
ACTN1-208ENST00000553370 NFATC3Q12968 1075 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PTP4A2Q12974 167 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 CYTH1Q15438 398 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 C14orf28Q4W4Y0 310 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 ARTNQ5T4W7 220 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 CDKAL1Q5VV42 579 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 BBS5Q8N3I7 341 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 CCDC112Q8NEF3 446 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 NSMCE1Q8WV22 266 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 OR1E3Q8WZA6 343 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 TTC9Q92623 222 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 TMEM159Q96B96 161 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 NUS1Q96E22 293 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 SGF29Q96ES7 293 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 RBM15Q96T37 977 aaKnown RBP eCLIP9.95□□□□□ -0.82
ACTN1-208ENST00000553370 CMKLR1Q99788 373 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 SEMA4CQ9C0C4 833 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 CLMPQ9H6B4 373 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 CARS2Q9HA77 564 aaKnown RBP9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PHPT1Q9NRX4 125 aaPredicted RBP9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 FANCLQ9NW38 375 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 SEPT3Q9UH03 358 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PCSK1NQ9UHG2 260 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 PCDHGA7Q9Y5G6 932 aa9.95□□□□□ -0.82
ACTN1-208ENST00000553370 WASH4PA8MWX3 477 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 EIF3CLB5ME19 914 aaKnown RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 NTN3O00634 580 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 CASC3O15234 703 aaKnown RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 CPP00450 1065 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 KRT10P13645 584 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 CCKBRP32239 447 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 AP1S1P61966 158 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 MYL5Q02045 173 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 KCNC4Q03721 635 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 PEX6Q13608 980 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 RFTN1Q14699 578 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 STX1AQ16623 288 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 CERCAMQ5T4B2 595 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 SPECC1LQ69YQ0 1117 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 ACAD10Q6JQN1 1059 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 RFX8Q6ZV50 586 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 DPPA4Q7L190 304 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 SPRED1Q7Z699 444 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 VASH2Q86V25 355 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 ZNF511Q8NB15 262 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 PLA2G15Q8NCC3 412 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 TSEN2Q8NCE0 465 aaKnown RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 FUBP1Q96AE4 644 aaKnown RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 EIF3CQ99613 913 aaKnown RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 GSDMCQ9BYG8 508 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 ZWILCHQ9H900 591 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 FGF22Q9HCT0 170 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 MRPL40Q9NQ50 206 aaKnown RBP9.94□□□□□ -0.82
ACTN1-208ENST00000553370 ANO10Q9NW15 660 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 LRIT1Q9P2V4 623 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 SIK3Q9Y2K2 1263 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 DGKBQ9Y6T7 804 aa9.94□□□□□ -0.82
ACTN1-208ENST00000553370 ZNF106Q9H2Y7 1883 aaKnown RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 PRAMEF33A0A0G2JMD5 474 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 A0A1W2PQM1 296 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 PRSS38A1L453 326 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 TMEM202A6NGA9 273 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 GOLGA6L22H0YM25 854 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 H3BRJ5 948 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 EFSO43281 561 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 BUB1BO60566 1050 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 PRAMEF10O60809 474 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 CYP2A6P11509 494 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 MYCLP1P12525 358 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ITIH1P19827 911 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ALDH4A1P30038 563 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ARL4AP40617 200 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 NOP2P46087 812 aaKnown RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 GNPDA1P46926 289 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 SKOR1P84550 965 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 TGIF1Q15583 401 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ASIC2Q16515 512 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ERMARDQ5T6L9 678 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 RAET1GQ6H3X3 334 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 DOK6Q6PKX4 331 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 SLC30A9Q6PML9 568 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 PIM3Q86V86 326 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms