RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FAM182AQ5T1J6 154 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ANKRD20A1Q5TYW2 823 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ANKRD20A3Q5VUR7 823 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ESRP1Q6NXG1 681 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 TSPAN33Q86UF1 283 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 SPATS2Q86XZ4 545 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 RAVER1Q8IY67 606 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 SLC35F6Q8N357 371 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 DTD2Q96FN9 168 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 OXNAD1Q96HP4 312 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 BMFQ96LC9 184 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ELF4Q99607 663 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 GORASP1Q9BQQ3 440 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 IL21RQ9HBE5 538 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 PCDHGB2Q9Y5G2 931 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 GOLGA4Q13439 2230 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 C1orf232A0A0U1RR37 186 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 SPTY2D1-AS1A0A0U1RR47 76 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 A0A1B0GTQ1 180 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 A8MX80 341 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 ANKRD66B4E2M5 251 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 CEP104O60308 925 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 PCDHGA12O60330 932 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 EPOP01588 193 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 PSMB4P28070 264 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 EPHA8P29322 1005 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 CXCR5P32302 372 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 RXRGP48443 463 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 STC1P52823 247 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 GDF10P55107 478 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 WNT3AP56704 352 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 P3H1Q32P28 736 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 UAP1L1Q3KQV9 507 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 DRICH1Q6PGQ1 229 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 CRTC1Q6UUV9 634 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 MACC1Q6ZN28 852 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 Q6ZSR6 202 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 ARHGEF18Q6ZSZ5 1173 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 ZNF765Q7L2R6 523 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 HSD11B1LQ7Z5J1 315 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 PARGQ86W56 976 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 KLHDC8BQ8IXV7 354 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 CBARPQ8N350 705 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 FAM71DQ8N9W8 422 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 CCDC110Q8TBZ0 833 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 PBKQ96KB5 322 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 MRGPRX2Q96LB1 330 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 SRPK1Q96SB4 655 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 TMEM121Q9BTD3 319 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 MLPHQ9BV36 600 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 FSD1LQ9BXM9 530 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 MBNL1Q9NR56 388 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 TM7SF3Q9NS93 570 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 KCND1Q9NSA2 647 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 UBP1Q9NZI7 540 aa11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 AAR2Q9Y312 384 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-209ENST00000552896 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 LOC285095A0A1B0GVY8 99 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 F5H423 210 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 CES2O00748 559 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 TM4SF5O14894 197 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 FLRT2O43155 660 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 GCATO75600 419 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 PCCBP05166 539 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 FGF1P05230 155 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 ITGAVP06756 1048 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 C1SP09871 688 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 ATXN1LP0C7T5 689 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 CD59P13987 128 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 TSHRP16473 764 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 HLA-DPA1P20036 260 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 TEAD1P28347 426 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 ETV3P41162 512 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 ID4P47928 161 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 THOP1P52888 689 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 KIAA1024LP59773 190 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 DPTQ07507 201 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 PDE1CQ14123 709 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 PTK2BQ14289 1009 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 FZD2Q14332 565 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 PRPSAP1Q14558 356 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 PTPRRQ15256 657 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 CCNG2Q16589 344 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 CDKN3Q16667 212 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 INAVAQ3KP66 663 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 DENND2CQ68D51 928 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 CCDC70Q6NSX1 233 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 PIP4P1Q86T03 277 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 NRSN1Q8IZ57 195 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 RASGEF1CQ8N431 466 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 IPMKQ8NFU5 416 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 C1orf54Q8WWF1 131 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 SMIM14Q96QK8 99 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 NAP1L3Q99457 506 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 MAGEE1Q9HCI5 957 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 HOMER3Q9NSC5 361 aa11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 TTC7AQ9ULT0 858 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-209ENST00000552896 ZNF711Q9Y462 761 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms