RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DEFB124Q8NES8 71 aa13.75□□□□□ -0.21
TROAP-213ENST00000550709 SETD7Q8WTS6 366 aaKnown RBP13.75□□□□□ -0.21
TROAP-213ENST00000550709 NUS1Q96E22 293 aa13.75□□□□□ -0.21
TROAP-213ENST00000550709 CAMK1GQ96NX5 476 aa13.75□□□□□ -0.21
TROAP-213ENST00000550709 DNAJC28Q9NX36 388 aa13.75□□□□□ -0.21
TROAP-213ENST00000550709 SHOC2Q9UQ13 582 aa13.75□□□□□ -0.21
TROAP-213ENST00000550709 ZNF148Q9UQR1 794 aa13.75□□□□□ -0.21
TROAP-213ENST00000550709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
TROAP-213ENST00000550709 SHROOM3Q8TF72 1996 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 CACNA1EQ15878 2313 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 A0A1B0GTQ1 180 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 C5orf60A6NFR6 353 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 K7ESM1 405 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 DFNA5O60443 496 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 ANXA9O76027 345 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 AGTP01019 485 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 IFNB1P01574 187 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 ITGAVP06756 1048 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 C1SP09871 688 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 MSNP26038 577 aaKnown RBP13.74□□□□□ -0.21
TROAP-213ENST00000550709 STC1P52823 247 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 GEMP55040 296 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 BNIP3Q12983 259 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 SLC14A1Q13336 389 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 FZD2Q14332 565 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 PRPSAP1Q14558 356 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 SHBQ15464 509 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 SLC14A2Q15849 920 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 FAXCQ5TGI0 409 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 LYSMD3Q7Z3D4 306 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 DCP2Q8IU60 420 aaKnown RBP13.74□□□□□ -0.21
TROAP-213ENST00000550709 PELI3Q8N2H9 469 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 CBARPQ8N350 705 aaPredicted RBP13.74□□□□□ -0.21
TROAP-213ENST00000550709 FAM174AQ8TBP5 190 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 DTD2Q96FN9 168 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 MS4A14Q96JA4 679 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 MRGPRX2Q96LB1 330 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 APOL2Q9BQE5 337 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 GORASP1Q9BQQ3 440 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 APOOQ9BUR5 198 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 FICDQ9BVA6 458 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 FSD1LQ9BXM9 530 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 ERVMER34-1Q9H9K5 563 aa13.74□□□□□ -0.21
TROAP-213ENST00000550709 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
TROAP-213ENST00000550709 TRPM6Q9BX84 2022 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 CEP192Q8TEP8 1941 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SPTY2D1-AS1A0A0U1RR47 76 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 GIPC1O14908 333 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 ZNF189O75820 626 aaPredicted RBP13.73□□□□□ -0.21
TROAP-213ENST00000550709 ZNF883P0CG24 379 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 ZNF30P17039 623 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 NOVA1P51513 510 aaKnown RBP13.73□□□□□ -0.21
TROAP-213ENST00000550709 GNG11P61952 73 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 MPP3Q13368 585 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 MTM1Q13496 603 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 OLIG2Q13516 323 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SPARCL1Q14515 664 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SUZ12Q15022 739 aaKnown RBP13.73□□□□□ -0.21
TROAP-213ENST00000550709 AGERQ15109 404 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SIX1Q15475 284 aaPredicted RBP13.73□□□□□ -0.21
TROAP-213ENST00000550709 OASLQ15646 514 aaKnown RBP13.73□□□□□ -0.21
TROAP-213ENST00000550709 CDKN3Q16667 212 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SIRPB2Q5JXA9 342 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 PNCKQ6P2M8 343 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 DGLUCYQ7Z3D6 616 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 TECPR1Q7Z6L1 1165 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 PRUNE1Q86TP1 453 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 NAXDQ8IW45 347 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 C17orf53Q8N3J3 647 aaPredicted RBP13.73□□□□□ -0.21
TROAP-213ENST00000550709 OXR1Q8N573 874 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 CCHCR1Q8TD31 782 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 COG1Q8WTW3 980 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SCAMP4Q969E2 229 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 FRMD8P1Q9BZ68 369 aaPredicted RBP13.73□□□□□ -0.21
TROAP-213ENST00000550709 GPR63Q9BZJ6 419 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SMARCAL1Q9NZC9 954 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 BTBD3Q9Y2F9 522 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SPO11Q9Y5K1 396 aa13.73□□□□□ -0.21
TROAP-213ENST00000550709 SPTBN4Q9H254 2564 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 PSMD11O00231 422 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 SCAMP1O15126 338 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 GCATO75600 419 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 METTL18O95568 372 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 ATXN1LP0C7T5 689 aaKnown RBP13.72□□□□□ -0.21
TROAP-213ENST00000550709 ETS1P14921 441 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 EPHA8P29322 1005 aaPredicted RBP13.72□□□□□ -0.21
TROAP-213ENST00000550709 RXRGP48443 463 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 YPEL5P62699 121 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 EIF2B5Q13144 721 aaKnown RBP13.72□□□□□ -0.21
TROAP-213ENST00000550709 PTK2BQ14289 1009 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 TCEA2Q15560 299 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 CCNG2Q16589 344 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 KCTD19Q17RG1 926 aaPredicted RBP13.72□□□□□ -0.21
TROAP-213ENST00000550709 PARP6Q2NL67 630 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 RAET1GQ6H3X3 334 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 PSAPL1Q6NUJ1 521 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 NYAP1Q6ZVC0 841 aa13.72□□□□□ -0.21
TROAP-213ENST00000550709 RD3Q7Z3Z2 195 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms