RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 FXYD1O00168 92 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 JUNBP17275 347 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 EEF1B2P24534 225 aaKnown RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF135P52742 658 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 ITGADQ13349 1161 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 TUBA3CQ13748 450 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 CAPRIN1Q14444 709 aaKnown RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 PLCL1Q15111 1095 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 NEPROQ6NW34 567 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 CHST15Q7LFX5 561 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 TBC1D21Q8IYX1 336 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 CLYBLQ8N0X4 340 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF513Q8N8E2 541 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 RAB2BQ8WUD1 216 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 FICDQ9BVA6 458 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 UBQLN1Q9UMX0 589 aaKnown RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 C1orf232A0A0U1RR37 186 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 TMEM247A6NEH6 219 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 DYNC1LI2O43237 492 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 CLPXO76031 633 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 MT-CYBP00156 380 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 MBL2P11226 248 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 CAPN3P20807 821 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 RPS12P25398 132 aaKnown RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 GNA12Q03113 381 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 FOXM1Q08050 763 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 DENND5AQ6IQ26 1287 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 ARMCX2Q7L311 632 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 MICALL2Q8IY33 904 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 SFRP1Q8N474 314 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 LEMD2Q8NC56 503 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 LRRC58Q96CX6 371 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 CELF6Q96J87 481 aaKnown RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF560Q96MR9 790 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 OLFM1Q99784 485 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 GDAP2Q9NXN4 497 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 BEST1O76090 585 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 SNAP29O95721 258 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 FYNP06241 537 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 ADARB1P78563 741 aaKnown RBP23.15■■□□□ 1.3
NPAS3-206ENST00000548645 FANCEQ9HB96 536 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 TREX1Q9NSU2 369 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 PSME2Q9UL46 239 aa23.15■■□□□ 1.3
NPAS3-206ENST00000548645 H0YAE9 185 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 PIRO00625 290 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 SPTLC1O15269 473 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 SEC14L2O76054 403 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 RXRGP48443 463 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 TMED10P49755 219 aaKnown RBP23.14■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF33AQ06730 810 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 SNX17Q15036 470 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 CCDC92Q53HC0 331 aaPredicted RBP23.14■■□□□ 1.3
NPAS3-206ENST00000548645 FCRL5Q96RD9 977 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 DDIT4Q9NX09 232 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 ANAPC2Q9UJX6 822 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 TRIM17Q9Y577 477 aa23.14■■□□□ 1.3
NPAS3-206ENST00000548645 CLDN5O00501 218 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 AURKAO14965 403 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 LDLRP01130 860 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 UMPSP11172 480 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 TSPAN8P19075 237 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 CLCN5P51795 746 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 MAPK10P53779 464 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 ZBTB46Q86UZ6 589 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 L3HYPDHQ96EM0 354 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 GPN2Q9H9Y4 310 aaPredicted RBP23.14■■□□□ 1.29
NPAS3-206ENST00000548645 OR12D3Q9UGF7 316 aa23.14■■□□□ 1.29
NPAS3-206ENST00000548645 KPNA4O00629 521 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-206ENST00000548645 CD4P01730 458 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 HOXD12P35452 270 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 POLR2IP36954 125 aaKnown RBP23.13■■□□□ 1.29
NPAS3-206ENST00000548645 ZNF678Q5SXM1 525 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 BROXQ5VW32 411 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 FAM35AQ86V20 835 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 GLT1D1Q96MS3 346 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 SOX17Q9H6I2 414 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-206ENST00000548645 RNF19AQ9NV58 838 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 HTR3EA5X5Y0 456 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 ALBP02768 609 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 TRIM16LQ309B1 348 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 UGT3A2Q3SY77 523 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 COQ5Q5HYK3 327 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 PAPD5Q8NDF8 572 aaKnown RBP23.13■■□□□ 1.29
NPAS3-206ENST00000548645 UBXN10Q96LJ8 280 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 PRKD2Q9BZL6 878 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 TUT1Q9H6E5 874 aaKnown RBP23.13■■□□□ 1.29
NPAS3-206ENST00000548645 TSC2P49815 1807 aa23.13■■□□□ 1.29
NPAS3-206ENST00000548645 HUS1O60921 280 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 LGALS2P05162 132 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 TTLL4Q14679 1199 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 GABPB2Q8TAK5 448 aaPredicted RBP23.12■■□□□ 1.29
NPAS3-206ENST00000548645 TRIM54Q9BYV2 358 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 NANOGQ9H9S0 305 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 ENTPD7Q9NQZ7 604 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 PCDHA9Q9Y5H5 950 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 MATN4O95460 622 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 MTHFD1P11586 935 aaKnown RBP23.12■■□□□ 1.29
NPAS3-206ENST00000548645 PNPLA4P41247 253 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 GEMP55040 296 aa23.12■■□□□ 1.29
NPAS3-206ENST00000548645 SEPT6Q14141 434 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms