RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	HLA-DQA2	P01906	255 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ENO3	P13929	434 aa	Predicted RBP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	FOSL2	P15408	326 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	GSTM2	P28161	218 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	RFC1	P35251	1148 aa	Predicted RBP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	RBM5	P52756	815 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	FKBP1A	P62942	108 aa	Known RBP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ACSM2A	Q08AH3	577 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	PPIL2	Q13356	520 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	VGLL4	Q14135	290 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	RBM39	Q14498	530 aa	Known RBP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ZACN	Q401N2	412 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	LRRC24	Q50LG9	513 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	C17orf99	Q6UX52	265 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	DSTYK	Q6XUX3	929 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ANKRD23	Q86SG2	305 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	SCN4B	Q8IWT1	228 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	EXOC8	Q8IYI6	725 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	PGBD5	Q8N414	524 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ZNF114	Q8NC26	417 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	TMEM163	Q8TC26	289 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ZBED3	Q96IU2	234 aa	Predicted RBP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	CCDC138	Q96M89	665 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	GUCD1	Q96NT3	240 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	THUMPD2	Q9BTF0	503 aa	Known RBP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ISCA1	Q9BUE6	129 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	C11orf49	Q9H6J7	331 aa		3.8	□□□□□ -1.8
RPAP3-205	ENST00000548211	ZSWIM8	A7E2V4	1837 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	MAPK8IP3	Q9UPT6	1336 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	SAA2-SAA4	A0A096LPE2	208 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	CLRN2	A0PK11	232 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	NPIPB11	E5RHQ5	1161 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	EYA2	O00167	538 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	TULP2	O00295	520 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	PDHX	O00330	501 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	TNPO2	O14787	897 aa	Known RBP	3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	DAO	P14920	347 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	CLCNKB	P51801	687 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	OAZ1	P54368	228 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	PRKCZ	Q05513	592 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	LMOD3	Q0VAK6	560 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	SNTA1	Q13424	505 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	ALKBH1	Q13686	389 aa	Known RBP	3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	STPG1	Q5TH74	334 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	WDR5B	Q86VZ2	330 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	CCAR1	Q8IX12	1150 aa	Known RBP	3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	POC1A	Q8NBT0	407 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	CCDC191	Q8NCU4	936 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	HDAC7	Q8WUI4	952 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	TMEM18	Q96B42	140 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	IL17F	Q96PD4	163 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	FRG2B	Q96QU4	278 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	MPHOSPH8	Q99549	860 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	CDX2	Q99626	313 aa	Predicted RBP	3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	NPFFR1	Q9GZQ6	430 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	HYPK	Q9NX55	129 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	TMOD2	Q9NZR1	351 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	BCCIP	Q9P287	314 aa	Known RBP eCLIP	3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	DBF4	Q9UBU7	674 aa	Predicted RBP	3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	DAPP1	Q9UN19	280 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	AK9	Q5TCS8	1911 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	UNC80	Q8N2C7	3258 aa		3.79	□□□□□ -1.8
RPAP3-205	ENST00000548211	DDX60L	Q5H9U9	1706 aa	Known RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	ARAP2	Q8WZ64	1704 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	DOCK3	Q8IZD9	2030 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	COL4A1	P02462	1669 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	MYO9B	Q13459	2157 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	LAMA3	Q16787	3333 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	IGLV5-37	A0A075B6J1	123 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	DYTN	A2CJ06	578 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	C17orf102	A2RUQ5	167 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	PEX14	O75381	377 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	PARN	O95453	639 aa	Known RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	DDX58	O95786	925 aa	Known RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	PAK4	O96013	591 aa	Predicted RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	PCCA	P05165	728 aa	Predicted RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	HOXB7	P09629	217 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	CKMT1A	P12532	417 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	AVPR2	P30518	371 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	DPP6	P42658	865 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	PCP4	P48539	62 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	DLG1	Q12959	904 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	GALNTL6	Q49A17	601 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	GXYLT1	Q4G148	440 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	TYW3	Q6IPR3	259 aa	Known RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	RHBDF2	Q6PJF5	856 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	FASTKD5	Q7L8L6	764 aa	Known RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	GATAD2A	Q86YP4	633 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	ZDHHC23	Q8IYP9	409 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	NEK9	Q8TD19	979 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	MORC4	Q8TE76	937 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	ARRDC3	Q96B67	414 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	HES6	Q96HZ4	224 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	PRMT6	Q96LA8	375 aa	Predicted RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	MXD3	Q9BW11	206 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	IFT27	Q9BW83	186 aa		3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	CLK4	Q9HAZ1	481 aa	Known RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	CWC25	Q9NXE8	425 aa	Predicted RBP	3.78	□□□□□ -1.8
RPAP3-205	ENST00000548211	UPB1	Q9UBR1	384 aa		3.78	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms