RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 GDPD4Q6W3E5 623 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 CAMK1DQ8IU85 385 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 PLPP6Q8IY26 295 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 RGL4Q8IZJ4 473 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 DNAAF3Q8N9W5 541 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 TADA1Q96BN2 335 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 ZBTB9Q96C00 473 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 EBNA1BP2Q99848 306 aaKnown RBP17.46■□□□□ 0.39
HDAC7-227ENST00000548080 FICDQ9BVA6 458 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 SGK2Q9HBY8 427 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 PARD6AQ9NPB6 346 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 TMEM74BQ9NUR3 256 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 BFARQ9NZS9 450 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 FZD4Q9ULV1 537 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 ITM2BQ9Y287 266 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 A0A087WUV0 522 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-227ENST00000548080 PATE3B3GLJ2 98 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 AGTP01019 485 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 RETP07949 1114 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 ITGB7P26010 798 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 MGAT1P26572 445 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 PHBP35232 272 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 TAS2R38P59533 333 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 GPX6P59796 221 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 RAD51Q06609 339 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 ZNF844Q08AG5 666 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 CDH17Q12864 832 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 SLC14A2Q15849 920 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 CEP85LQ5SZL2 805 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 TCEAL6Q6IPX3 200 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 C3orf62Q6ZUJ4 267 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 ERN2Q76MJ5 926 aaKnown RBP17.45■□□□□ 0.38
HDAC7-227ENST00000548080 MPP5Q8N3R9 675 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 TCEAL3Q969E4 200 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 MRGPRX2Q96LB1 330 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 SH3GL2Q99962 352 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 APOL2Q9BQE5 337 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 CCDC77Q9BR77 488 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 TMEM109Q9BVC6 243 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 FSD1LQ9BXM9 530 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 MIR1-1HGQ9H1L0 117 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 PIH1D1Q9NWS0 290 aaKnown RBP17.45■□□□□ 0.38
HDAC7-227ENST00000548080 ZC3H7BQ9UGR2 993 aaKnown RBP17.45■□□□□ 0.38
HDAC7-227ENST00000548080 GGT7Q9UJ14 662 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 PLXNA2O75051 1894 aa17.45■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3DA0A087WVF3 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3IA0A087WXS9 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3EA0A087X179 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3KA0A087X1G2 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3FA6NER0 549 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3LB9A6J9 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SPAG6O75602 509 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 PRKCGP05129 697 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 GSTA2P09210 222 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3HP0C7X1 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SSTR1P30872 391 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 MAT2AP31153 395 aaKnown RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 MPLP40238 635 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 ABL2P42684 1182 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SEMG2Q02383 582 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 HSP90B2PQ58FF3 399 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 ZNF805Q5CZA5 627 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3GQ6DHY5 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3CQ6IPX1 549 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 RANBP10Q6VN20 620 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 CROCCP2Q86T23 111 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 CCNJLQ8IV13 435 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 TBC1D3Q8IZP1 549 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 GOLGA6L1Q8N7Z2 621 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 KLK6Q92876 244 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 STAMBPL1Q96FJ0 436 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 CFAP36Q96G28 342 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 PPP1R16AQ96I34 528 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 NOD2Q9HC29 1040 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 MED4Q9NPJ6 270 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 FSCN3Q9NQT6 498 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 EIF2B4Q9UI10 523 aaKnown RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 MAD1L1Q9Y6D9 718 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 PLRG1O43660 514 aaKnown RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SYF2O95926 243 aaKnown RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 IGHV4-34P06331 123 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SERPINF2P08697 491 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 ADRB3P13945 408 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 CR2P20023 1033 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 NEK3P51956 506 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 NSUN2Q08J23 767 aaKnown RBP eCLIP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SFSWAPQ12872 951 aaKnown RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 IHHQ14623 411 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 STAT4Q14765 748 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SF3A2Q15428 464 aaKnown RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 PCSK7Q16549 785 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 DENND5AQ6IQ26 1287 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 CASC4Q6P4E1 433 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 FBXL19Q6PCT2 694 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 CAPN12Q6ZSI9 719 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 ZSWIM9Q86XI8 627 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 PAF1Q8N7H5 531 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 OR2T34Q8NGX1 318 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 FAM131CQ96AQ9 280 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 BIRC7Q96CA5 298 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms