RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 CLCNKBP51801 687 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 UGCGQ16739 394 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 TBRG1Q3YBR2 411 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 DENND1BQ6P3S1 775 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 MFSD4AQ8N468 514 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 ARFGAP1Q8N6T3 406 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 MFSD2AQ8NA29 543 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 ZHX1-C8orf76Q96EF9 292 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 ITCHQ96J02 903 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 SLC45A3Q96JT2 553 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 TAAR1Q96RJ0 339 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 UBA2Q9UBT2 640 aaPredicted RBP11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 HMGXB4Q9UGU5 601 aa11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 EVLQ9UI08 416 aaPredicted RBP11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 RUVBL2Q9Y230 463 aaKnown RBP11.97□□□□□ -0.49
RBFOX1-208ENST00000547372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 PRKCGP05129 697 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 C2P06681 752 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 POLBP06746 335 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 SNRPB2P08579 225 aaKnown RBP11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 MPP1Q00013 466 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 TKFCQ3LXA3 575 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 MAP4K3Q8IVH8 894 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 CDKL3Q8IVW4 592 aaPredicted RBP11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 PQLC3Q8N755 202 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 NIPA2Q8N8Q9 360 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 OR6Q1Q8NGQ2 317 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 IL31RAQ8NI17 732 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 UBASH3BQ8TF42 649 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 RNF34Q969K3 372 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 TP53INP1Q96A56 240 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 CERS2Q96G23 380 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 COA1Q9GZY4 146 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 CD320Q9NPF0 282 aa11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 WBP11Q9Y2W2 641 aaKnown RBP11.96□□□□□ -0.49
RBFOX1-208ENST00000547372 B8ZZF3 427 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 RPS6KA4O75676 772 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 UPK1BO75841 260 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 ARHGEF15O94989 841 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 NUMBP49757 651 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 SUZ12Q15022 739 aaKnown RBP11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 ZACNQ401N2 412 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 TRIM60Q495X7 471 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 VPS26BQ4G0F5 336 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 C6orf10Q5SRN2 563 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 TAF2Q6P1X5 1199 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 SLC39A4Q6P5W5 647 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 CDH24Q86UP0 819 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 SULF1Q8IWU6 871 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 C8orf59Q8N0T1 100 aaPredicted RBP11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 C7orf57Q8NEG2 295 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 C8orf48Q96LL4 319 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 NODALQ96S42 347 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 FEM1AQ9BSK4 669 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 NIF3L1Q9GZT8 377 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 FBRSL1Q9HCM7 1045 aaKnown RBP11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 CCM2LQ9NUG4 571 aaPredicted RBP11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 UBP1Q9NZI7 540 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 PDE10AQ9Y233 779 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.5
RBFOX1-208ENST00000547372 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 MTRF1O75570 445 aaKnown RBP11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 TPH1P17752 444 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 RRM2P31350 389 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 JAK3P52333 1124 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 PRKAA1Q13131 559 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 RFTN1Q14699 578 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 NXNL2Q5VZ03 156 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 ZNF438Q7Z4V0 828 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 GLRX5Q86SX6 157 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 AMIGO1Q86WK6 493 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 TBC1D21Q8IYX1 336 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 SMG8Q8ND04 991 aaKnown RBP11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 RHOXF1Q8NHV9 184 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 GTF2H4Q92759 462 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 ST6GALNAC4Q9H4F1 302 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 ARMC1Q9NVT9 282 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 DNMT3LQ9UJW3 386 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 TCRBV5S1A1TA0A578 114 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 KCNK1O00180 336 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 NOS1APO75052 506 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 DGAT1O75907 488 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 PGLSO95336 258 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 CST3P01034 146 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 ZNF267Q14586 743 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 CTF1Q16619 201 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 FSTL4Q6MZW2 842 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 SLC16A12Q6ZSM3 486 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 NECAB2Q7Z6G3 386 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 THAP5Q7Z6K1 395 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 TRIB2Q92519 343 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 MID2Q9UJV3 735 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 COL24A1Q17RW2 1714 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 FAM25AB3EWG3 89 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 FAM25CB3EWG5 89 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 FAM25GB3EWG6 89 aa11.95□□□□□ -0.5
RBFOX1-208ENST00000547372 G3V2L1 256 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms