RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 CNGA3Q16281 694 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 DPYSL2Q16555 572 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 E4F1Q66K89 784 aaPredicted RBP14.14□□□□□ -0.15
DDX11-228ENST00000545115 SFTPA2Q8IWL1 248 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 PELI3Q8N2H9 469 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 BBS5Q8N3I7 341 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 CCL4L1Q8NHW4 92 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 PDCD6IPQ8WUM4 868 aaKnown RBP14.14□□□□□ -0.15
DDX11-228ENST00000545115 TRIM11Q96F44 468 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 MED8Q96G25 268 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 CMKLR1Q99788 373 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 CARS2Q9HA77 564 aaKnown RBP14.14□□□□□ -0.15
DDX11-228ENST00000545115 MRPL47Q9HD33 250 aaKnown RBP14.14□□□□□ -0.15
DDX11-228ENST00000545115 PHPT1Q9NRX4 125 aaPredicted RBP14.14□□□□□ -0.15
DDX11-228ENST00000545115 PCDHGC4Q9Y5F7 938 aa14.14□□□□□ -0.15
DDX11-228ENST00000545115 ATMQ13315 3056 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 A0A1W2PQC6 194 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 TTC24A2A3L6 582 aaPredicted RBP14.13□□□□□ -0.15
DDX11-228ENST00000545115 B8ZZF3 427 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 DDX3XO00571 662 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDX11-228ENST00000545115 HEXIM1O94992 359 aaKnown RBP14.13□□□□□ -0.15
DDX11-228ENST00000545115 MBD3O95983 291 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 PEX11BO96011 259 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 LIPCP11150 499 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 CCNB1P14635 433 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 ITIH1P19827 911 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 CR2P20023 1033 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 VIPR1P32241 457 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 KLHL30Q0D2K2 578 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 ILF3Q12906 894 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDX11-228ENST00000545115 SMTNL2Q2TAL5 461 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 MAP9Q49MG5 647 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 FILIP1LQ4L180 1135 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 TMCO3Q6UWJ1 677 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 HEATR4Q86WZ0 1026 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 SLITRK4Q8IW52 837 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 GPBAR1Q8TDU6 330 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 MGME1Q9BQP7 344 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 TEX101Q9BY14 249 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 GSDMCQ9BYG8 508 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 MYO1AQ9UBC5 1043 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 PHTF1Q9UMS5 762 aa14.13□□□□□ -0.15
DDX11-228ENST00000545115 PSMD11O00231 422 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 EFSO43281 561 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 MAFKO60675 156 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 CYP2A6P11509 494 aaPredicted RBP14.12□□□□□ -0.15
DDX11-228ENST00000545115 AMPD1P23109 780 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 IL1R2P27930 398 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 SERPINB6P35237 376 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 ETV3P41162 512 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 CDK3Q00526 305 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 TRAF2Q12933 501 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 TGIF1Q15583 401 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 ANO6Q4KMQ2 910 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 RALGPS1Q5JS13 557 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 DENND2CQ68D51 928 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 POLNQ7Z5Q5 900 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 PGBD5Q8N414 524 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 ATPAF2Q8N5M1 289 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 NSMCE1Q8WV22 266 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 HSPH1Q92598 858 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 DTD2Q96FN9 168 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 CSPG4P5Q96PW8 444 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 BPIFA3Q9BQP9 254 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 SUDS3Q9H7L9 328 aaPredicted RBP14.12□□□□□ -0.15
DDX11-228ENST00000545115 NOD2Q9HC29 1040 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDX11-228ENST00000545115 SPATS2LQ9NUQ6 558 aaKnown RBP14.12□□□□□ -0.15
DDX11-228ENST00000545115 ETNK2Q9NVF9 386 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 TRNAU1APQ9NX07 287 aaKnown RBP14.12□□□□□ -0.15
DDX11-228ENST00000545115 SEPT10Q9P0V9 454 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 AHCTF1Q8WYP5 2266 aa14.12□□□□□ -0.15
DDX11-228ENST00000545115 PRAMEF33A0A0G2JMD5 474 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 SMTNL1A8MU46 457 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 AGRPO00253 132 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 ZW10O43264 779 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 PRAMEF10O60809 474 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 CPNE6O95741 557 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 CEACAM5P06731 702 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 TCF4P15884 667 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 LHCGRP22888 699 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 TEAD1P28347 426 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 MMP13P45452 471 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 CDH6P55285 790 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 MAZP56270 477 aaKnown RBP14.11□□□□□ -0.15
DDX11-228ENST00000545115 B4GALNT1Q00973 533 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 NR1D2Q14995 579 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 CLPPQ16740 277 aaPredicted RBP14.11□□□□□ -0.15
DDX11-228ENST00000545115 PHF19Q5T6S3 580 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 RAET1GQ6H3X3 334 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 USP53Q70EK8 1073 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 USP45Q70EL2 814 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 TMPRSS9Q7Z410 1059 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 ZNF438Q7Z4V0 828 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 HSD11B1LQ7Z5J1 315 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 PIM3Q86V86 326 aa14.11□□□□□ -0.15
DDX11-228ENST00000545115 C17orf82Q86X59 251 aaPredicted RBP14.11□□□□□ -0.15
DDX11-228ENST00000545115 NRROSQ86YC3 692 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms