RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ZNF607Q96SK3 696 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 FNDC11Q9BVV2 318 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 GNEQ9Y223 722 aaKnown RBP13.13□□□□□ -0.31
TNC-212ENST00000542877 MFHAS1Q9Y4C4 1052 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 POLR3HQ9Y535 204 aaPredicted RBP13.13□□□□□ -0.31
TNC-212ENST00000542877 IRGMA1A4Y4 181 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 MOXD2PA6NHM9 499 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 SSNA1O43805 119 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 SIN3BO75182 1162 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 BMP7P18075 431 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 MYL9P24844 172 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 CYP4F2P78329 520 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 CYP4F3Q08477 520 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 CPSF6Q16630 551 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNC-212ENST00000542877 CERCAMQ5T4B2 595 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.13□□□□□ -0.31
TNC-212ENST00000542877 DET1Q7L5Y6 550 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 CXXC5Q7LFL8 322 aaKnown RBP13.13□□□□□ -0.31
TNC-212ENST00000542877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNC-212ENST00000542877 COMMD9Q9P000 198 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 ADGRE2Q9UHX3 823 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 AGO1Q9UL18 857 aaKnown RBP13.13□□□□□ -0.31
TNC-212ENST00000542877 MRPS7Q9Y2R9 242 aaKnown RBP13.13□□□□□ -0.31
TNC-212ENST00000542877 KCNE2Q9Y6J6 123 aa13.13□□□□□ -0.31
TNC-212ENST00000542877 B4GALT4O60513 344 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 CCR4P51679 360 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 MAXP61244 160 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 MRPS6P82932 125 aaKnown RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 UGCGQ16739 394 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 FNBP1LQ5T0N5 605 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 MON1BQ7L1V2 547 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 SLCO6A1Q86UG4 719 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 XYLT1Q86Y38 959 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 SUSD6Q92537 303 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 COPS5Q92905 334 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 CSPG4P5Q96PW8 444 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 RNF19AQ9NV58 838 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 OGDHLQ9ULD0 1010 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 NCKAP1Q9Y2A7 1128 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 SLC9A3R1O14745 358 aaPredicted RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 HIST1H2ABP04908 130 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 SMIM10L2AP0DMW4 78 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 SMIM10L2BP0DMW5 78 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 ACLYP53396 1101 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 GPAT3Q53EU6 434 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 HIST3H2AQ7L7L0 130 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 FAM35AQ86V20 835 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 HIST1H2ACQ93077 130 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.31
TNC-212ENST00000542877 MRPL17Q9NRX2 175 aaKnown RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 SLC6A2P23975 617 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 JAM2P57087 298 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 RAB25P57735 213 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 GALNT3Q14435 633 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 MED22Q15528 200 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 EEF1DP3Q658K8 133 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 HJURPQ8NCD3 748 aaPredicted RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 TEX47Q8TBZ9 253 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 MGRN1O60291 552 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 AMHP03971 560 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 LYNP07948 512 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 CSH1P0DML2 217 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 CSH2P0DML3 217 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 NELFEP18615 380 aaKnown RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 ADSLP30566 484 aaPredicted RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 MC4RP32245 332 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 CDKN2BP42772 138 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 LPIN1Q14693 890 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 GRIK5Q16478 980 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 THAP5Q7Z6K1 395 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 SLC4A11Q8NBS3 891 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 BSNDQ8WZ55 320 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 ZNHIT2Q9UHR6 403 aa13.12□□□□□ -0.31
TNC-212ENST00000542877 WBP11Q9Y2W2 641 aaKnown RBP13.12□□□□□ -0.31
TNC-212ENST00000542877 TULP2O00295 520 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 BLMHQ13867 455 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 PTCHD4Q6ZW05 846 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 DENND1CQ8IV53 801 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 FCRL2Q96LA5 508 aaPredicted RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 BTBD9Q96Q07 612 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 AP3D1O14617 1153 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 B4GALT5O43286 388 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 ADRA1BP35368 520 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 CCNIQ14094 377 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 DLG2Q15700 870 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 EML3Q32P44 896 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 GPR156Q8NFN8 814 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 COX4I2Q96KJ9 171 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 QKIQ96PU8 341 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNC-212ENST00000542877 DENND2DQ9H6A0 471 aaPredicted RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 TMPRSS4Q9NRS4 437 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms