RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-219	ENST00000542112	LPGAT1	Q92604	370 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	PHF21A	Q96BD5	680 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	TRMT2B	Q96GJ1	504 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	PPP3R2	Q96LZ3	170 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	SERPINB11	Q96P15	392 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	ERGIC2	Q96RQ1	377 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	SERPINI1	Q99574	410 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	CHP1	Q99653	195 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	PIP5K1A	Q99755	562 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	C7orf25	Q9BPX7	421 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	CLSTN3	Q9BQT9	956 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	CCM2	Q9BSQ5	444 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	CHID1	Q9BWS9	393 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	HEMGN	Q9BXL5	484 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	NOL6	Q9H6R4	1146 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	GAREM1	Q9H706	876 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	RPF2	Q9H7B2	306 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	C7orf69	Q9H7B7	122 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	EFCAB1	Q9HAE3	211 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	MLXIPL	Q9NP71	852 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	CABP5	Q9NP86	173 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	MRPS30	Q9NP92	439 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	IFT46	Q9NQC8	304 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	FBXO8	Q9NRD0	319 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	PCDHB16	Q9NRJ7	776 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	KCNH7	Q9NS40	1196 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	CHST7	Q9NS84	486 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	GFOD1	Q9NXC2	390 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	GLTP	Q9NZD2	209 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	VPS54	Q9P1Q0	977 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	ACTR3B	Q9P1U1	418 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	COPG2	Q9UBF2	871 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	SRRD	Q9UH36	339 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	TAGLN3	Q9UI15	199 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	RPS6KA6	Q9UK32	745 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	PSME2	Q9UL46	239 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	DENND2A	Q9ULE3	1009 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	ZFR2	Q9UPR6	939 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	ACOT9	Q9Y305	439 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	NDUFAF1	Q9Y375	327 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	MRPS23	Q9Y3D9	190 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	MTF2	Q9Y483	593 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	AP4B1	Q9Y6B7	739 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	DCC	P43146	1447 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	C1orf167	Q5SNV9	1468 aa		4.36	□□□□□ -1.71
SNHG1-219	ENST00000542112	FAM208A	Q9UK61	1670 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	PSME4	Q14997	1843 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112		A0A0A6YYK5	440 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112		A0A1B0GVM2	712 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	PIPSL	A2A3N6	862 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	HMX2	A2RU54	273 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	OR6C74	A6NCV1	312 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	SAC3D1	A6NKF1	404 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	PCP4L1	A6NKN8	68 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112		A8MX80	341 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	KCNJ18	B7U540	433 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	LOC110117498-PIK3R3	F6TDL0	507 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112		H3BMQ9	156 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	STMND1	H3BQB6	276 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	UBXN8	O00124	270 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	KLF11	O14901	512 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	PCDH17	O14917	1159 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	PRODH	O43272	600 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	RIPK2	O43353	540 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	CCNK	O75909	580 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	CIAO1	O76071	339 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	CBX6	O95503	412 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	CRTAM	O95727	393 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	LDOC1	O95751	146 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	PTBP3	O95758	552 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	CBX7	O95931	251 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	DHFR	P00374	187 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	APOA1	P02647	267 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	SLC4A1	P02730	911 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	OPN1MW	P04001	364 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	S100A8	P05109	93 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	KRT18	P05783	430 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	APOA4	P06727	396 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	ASNS	P08243	561 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	ABHD2	P08910	425 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	LTA4H	P09960	611 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	POLR2M	P0CAP2	368 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	SMIM6	P0DI80	62 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	OPN1MW2	P0DN77	364 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	OPN1MW3	P0DN78	364 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	SAG	P10523	405 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	ACADM	P11310	421 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	MYL4	P12829	197 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	POU2F1	P14859	743 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	BRAF	P15056	766 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	AKR1B1	P15121	316 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	ATP6V1B1	P15313	513 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	CYP11B1	P15538	503 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	JUNB	P17275	347 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	CKMT2	P17540	419 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	ITGAL	P20701	1170 aa		4.35	□□□□□ -1.71
SNHG1-219	ENST00000542112	FBLN1	P23142	703 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms