RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GALNT3Q14435 633 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 PCSK7Q16549 785 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 MEI1Q5TIA1 1274 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 LRRC66Q68CR7 880 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 PNCKQ6P2M8 343 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 KDELC1Q6UW63 502 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 GLRX5Q86SX6 157 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 DCP2Q8IU60 420 aaKnown RBP9.74□□□□□ -0.85
YBX3-212ENST00000542002 RBFAQ8N0V3 343 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 UBL4BQ8N7F7 174 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 LPCAT1Q8NF37 534 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 FAM174AQ8TBP5 190 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 TSACCQ96A04 125 aaPredicted RBP9.74□□□□□ -0.85
YBX3-212ENST00000542002 WDR24Q96S15 920 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 AGAP2Q99490 1192 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 ABCG8Q9H221 673 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 CD84Q9UIB8 345 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 CACNA1AO00555 2505 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 LOC285095A0A1B0GVY8 99 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 HACD1B0YJ81 288 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 H7C0C1 242 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 SCAMP1O15126 338 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 SIGLEC6O43699 453 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 KRT86O43790 486 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 PMPCBO75439 489 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 DKK1O94907 266 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 TJP3O95049 919 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 SOD1P00441 154 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 CCDC175P0C221 793 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 PIRTP0C851 137 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 RBP3P10745 1247 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 CYP2A6P11509 494 aaPredicted RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 NME1P15531 152 aaKnown RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 ATP5OP48047 213 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 STC1P52823 247 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 EIF3EP60228 445 aaKnown RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 CDK18Q07002 472 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 DNAJC3Q13217 504 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 C1orf61Q13536 156 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 ALG11Q2TAA5 492 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 ESRP1Q6NXG1 681 aaKnown RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 USP45Q70EL2 814 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 PID1Q7Z2X4 250 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 PARGQ86W56 976 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 TXLNBQ8N3L3 684 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 PTCD2Q8WV60 388 aaKnown RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 SCAMP4Q969E2 229 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 DTD2Q96FN9 168 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 IFT43Q96FT9 208 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 MRGPRX2Q96LB1 330 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 FCRL5Q96RD9 977 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 LYSMD1Q96S90 227 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 MLPHQ9BV36 600 aaPredicted RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 C1QTNF7Q9BXJ2 289 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 TSGA10Q9BZW7 698 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 CLPBQ9H078 707 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 MRPL40Q9NQ50 206 aaKnown RBP9.73□□□□□ -0.85
YBX3-212ENST00000542002 PPP2R2CQ9Y2T4 447 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 SPO11Q9Y5K1 396 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 TRPM6Q9BX84 2022 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 WDFY3Q8IZQ1 3526 aa9.73□□□□□ -0.85
YBX3-212ENST00000542002 TMEM131Q92545 1883 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 LY6G6EA0A0G2JKS1 128 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 CAPN8A6NHC0 703 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 AURKAO14965 403 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 FFAR2O15552 330 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 TNFSF14O43557 240 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 AGTP01019 485 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 HOXC4P09017 264 aaPredicted RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 FTH1P19P0C7X4 201 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 JUNDP17535 347 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 CHRNA4P43681 627 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 POLD2P49005 469 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 THOP1P52888 689 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 EPHB1P54762 984 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 WNT3AP56704 352 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 RPL26P61254 145 aaKnown RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 MTM1Q13496 603 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 OLIG2Q13516 323 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 NFATC4Q14934 902 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 TCEA2Q15560 299 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 KCTD19Q17RG1 926 aaPredicted RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 ANKRD20A2Q5SQ80 823 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 CCDC181Q5TID7 509 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 ANKRD20A1Q5TYW2 823 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 ANKRD20A3Q5VUR7 823 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 DARS2Q6PI48 645 aaKnown RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 ENPP7Q6UWV6 458 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 MACC1Q6ZN28 852 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 LYSMD3Q7Z3D4 306 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 MARCH9Q86YJ5 346 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 REXO1L1PQ8IX06 675 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 CHCHD4Q8N4Q1 142 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 OXR1Q8N573 874 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 ZNF548Q8NEK5 533 aaPredicted RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 SLC35B2Q8TB61 432 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 CCDC110Q8TBZ0 833 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 OR1E3Q8WZA6 343 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms