RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ATXN2Q99700 1313 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 CCL22O00626 93 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 TRAFD1O14545 582 aaPredicted RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 HTRA2O43464 458 aaPredicted RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 BUD23O43709 281 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 SMNDC1O75940 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
THBS3-210ENST00000541576 ITGA2BP08514 1039 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 LINGO3P0C6S8 592 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 TARSP26639 723 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 SPRP35270 261 aaPredicted RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 RECQLP46063 649 aaPredicted RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 GRIA4P48058 902 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 RPL26P61254 145 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 PRAMEP78395 509 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 RAD51Q06609 339 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 RUNX3Q13761 415 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 COL19A1Q14993 1142 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 TAF1AQ15573 450 aaPredicted RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 CCDC6Q16204 474 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 GAB4Q2WGN9 574 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 C11orf91Q3C1V1 193 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 NEPROQ6NW34 567 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 TMEM154Q6P9G4 183 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 ISLR2Q6UXK2 745 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 DPY19L3Q6ZPD9 716 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 Q6ZVU0 165 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 CNTN4Q8IWV2 1026 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 PNPLA1Q8N8W4 532 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 SMRP1Q8NCR6 262 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 OR6P1Q8NGX9 317 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 GABPB2Q8TAK5 448 aaPredicted RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 DTX3LQ8TDB6 740 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 ALKBH8Q96BT7 664 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 DNAJC1Q96KC8 554 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 MRGPRX3Q96LB0 322 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 NECTIN4Q96NY8 510 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 RBBP8Q99708 897 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 SSU72Q9NP77 194 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 NKIRAS1Q9NYS0 192 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 GTSE1Q9NYZ3 720 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 RIMKLBQ9ULI2 386 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 RPL26L1Q9UNX3 145 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 USH1CQ9Y6N9 552 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 KIF26AQ9ULI4 1882 aaPredicted RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 C2orf81A6NN90 581 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 AURKAO14965 403 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 SLC7A4O43246 635 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 POP4O95707 220 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 SRPRAP08240 638 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 GABRB3P28472 473 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 ARSDP51689 593 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 CSE1LP55060 971 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 PDE1BQ01064 536 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 UGP2Q16851 508 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 ZNF470Q6ECI4 717 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 CDHR3Q6ZTQ4 885 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 DENND6AQ8IWF6 608 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 ACVR1CQ8NER5 493 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 MDGA1Q8NFP4 955 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 TTC8Q8TAM2 541 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 CALML6Q8TD86 181 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 STYXQ8WUJ0 223 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 PIH1D2Q8WWB5 315 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 HDAC10Q969S8 669 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 VOPP1Q96AW1 172 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 NAF1Q96HR8 494 aaKnown RBP8.7□□□□□ -1.02
THBS3-210ENST00000541576 TUBGCP5Q96RT8 1024 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 MCMBPQ9BTE3 642 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 ZDHHC6Q9H6R6 413 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 ELOVL2Q9NXB9 296 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 HACD3Q9P035 362 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 SLC17A7Q9P2U7 560 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 GRID1Q9ULK0 1009 aa8.7□□□□□ -1.02
THBS3-210ENST00000541576 SIN3BO75182 1162 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 ECI2O75521 394 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 SLC4A1P02730 911 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 ALDOAP04075 364 aaKnown RBP8.69□□□□□ -1.02
THBS3-210ENST00000541576 KCNA4P22459 653 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 SP100P23497 879 aaPredicted RBP8.69□□□□□ -1.02
THBS3-210ENST00000541576 GDI1P31150 447 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 LIMK2P53671 638 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 SLC18A1P54219 525 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 ST8SIA6P61647 398 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 TMPRSS15P98073 1019 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 ACVR1Q04771 509 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 KDSRQ06136 332 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 MESP2Q0VG99 397 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 DNAJC3Q13217 504 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 CTBP1Q13363 440 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 PTPRNQ16849 979 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 MUM1Q2TAK8 710 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 TIFABQ6ZNK6 161 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 PLPP6Q8IY26 295 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 OR13C4Q8NGS5 318 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 OR2A12Q8NGT7 310 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 TCP10LQ8TDR4 215 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 ATXN7L3BQ96GX2 97 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 TBATAQ96M53 351 aa8.69□□□□□ -1.02
THBS3-210ENST00000541576 CPEB1Q9BZB8 566 aaKnown RBP8.69□□□□□ -1.02
THBS3-210ENST00000541576 NSRP1Q9H0G5 558 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms