RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 RBM20Q5T481 1227 aaKnown RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 ADGRD1Q6QNK2 874 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 BBS7Q8IWZ6 715 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 FSTL5Q8N475 847 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 FITM2Q8N6M3 262 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 SIDT2Q8NBJ9 832 aaKnown RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CEP70Q8NHQ1 597 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 SELENOMQ8WWX9 145 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CCDC126Q96EE4 140 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 ADNPQ9H2P0 1102 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 VCX3AQ9NNX9 186 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 TCAF1Q9Y4C2 921 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 AK5Q9Y6K8 562 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 UBXN8O00124 270 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 BPGMP07738 259 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 KRT16P08779 473 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CALB2P22676 271 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CDH4P55283 916 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 PRMT2P55345 433 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 PDE1CQ14123 709 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 MPP2Q14168 576 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 TSNQ15631 228 aaKnown RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 ATAT1Q5SQI0 421 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 OTUD3Q5T2D3 398 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 FAM126BQ8IXS8 530 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 RAB42Q8N4Z0 105 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 TSPAN18Q96SJ8 248 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 SMAD5Q99717 465 aaKnown RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 EBF4Q9BQW3 602 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 VPS45Q9NRW7 570 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 SLCO3A1Q9UIG8 710 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 PRKAB1Q9Y478 270 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 EME2A4GXA9 379 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ALADP13716 330 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ATP5F1P24539 256 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 PTPN4P29074 926 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CDH5P33151 784 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 VIPR2P41587 438 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 TTPAP49638 278 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 THOP1P52888 689 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CYP4F2P78329 520 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 PPIDQ08752 370 aaKnown RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 IFNLR1Q8IU57 520 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 COLGALT2Q8IYK4 626 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 OR14C36Q8NHC7 312 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CXorf40AQ8TE69 158 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 HEXDCQ8WVB3 486 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D10AQ9BXI6 508 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ADAM7Q9H2U9 754 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 VRTNQ9H8Y1 702 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 USP29Q9HBJ7 922 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 IMP3Q9NV31 184 aaKnown RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ASF1AQ9Y294 204 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ABHD14A-ACY1A0A1B0GW23 586 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 H0Y858 1186 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ABLIM1O14639 778 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 SLC9A3R1O14745 358 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 HSPA7P48741 367 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 AIF1P55008 147 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 MRPS22P82650 360 aaKnown RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CACHD1Q5VU97 1274 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 TMEM198Q66K66 360 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 C16orf89Q6UX73 402 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 BNC2Q6ZN30 1099 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 LYSMD3Q7Z3D4 306 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF781Q8N8C0 355 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 INPP5DQ92835 1189 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CDK15Q96Q40 435 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 HAPLN3Q96S86 360 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 FAM126AQ9BYI3 521 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CAAP1Q9H8G2 361 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 ARL8BQ9NVJ2 186 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 COPG2Q9UBF2 871 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 EIF3LQ9Y262 564 aaKnown RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 TMEM233B4DJY2 109 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 USP1O94782 785 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CLDN7O95471 211 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CNPP09543 421 aaKnown RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 PRSS56P0CW18 603 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 EN2P19622 333 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 SIX1Q15475 284 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 LRRC23Q53EV4 343 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 TSTD2Q5T7W7 516 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 PIK3R6Q5UE93 754 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 SLC9A4Q6AI14 798 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 AFTPHQ6ULP2 937 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 CAND1Q86VP6 1230 aaKnown RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 MMAAQ8IVH4 418 aaKnown RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 FIG4Q92562 907 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 COL26A1Q96A83 441 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 SYT11Q9BT88 431 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 GATA5Q9BWX5 397 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 MAGEH1Q9H213 219 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 SMOC2Q9H3U7 446 aa9.55□□□□□ -0.88
TTC39C-203ENST00000540918 POLR3BQ9NW08 1133 aaPredicted RBP9.55□□□□□ -0.88
TTC39C-203ENST00000540918 KIF17Q9P2E2 1029 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms