RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 MTA2O94776 668 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 HEXIM1O94992 359 aaKnown RBP10.4□□□□□ -0.74
CDCA3-208ENST00000540683 PGLSO95336 258 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 GIMD1P0DJR0 217 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 GJC1P36383 396 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 NR2C2P49116 596 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 TFDP2Q14188 446 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 DPYSL3Q14195 570 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 CDKN3Q16667 212 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 ISXQ2M1V0 245 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 TBC1D25Q3MII6 688 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 ALG1LQ6GMV1 187 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 ZNF765Q7L2R6 523 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 RD3Q7Z3Z2 195 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 RHOT1Q8IXI2 618 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 CCDC13Q8IYE1 715 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 AVL9Q8NBF6 648 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 CCNYQ8ND76 341 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 WDR36Q8NI36 951 aaKnown RBP10.4□□□□□ -0.74
CDCA3-208ENST00000540683 SLC35G2Q8TBE7 412 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 MAML1Q92585 1016 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 HDAC11Q96DB2 347 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 MCCC1Q96RQ3 725 aaPredicted RBP10.4□□□□□ -0.74
CDCA3-208ENST00000540683 SEMA3CQ99985 751 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 DPYSL5Q9BPU6 564 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 DPH1Q9BZG8 443 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 NHEJ1Q9H9Q4 299 aaPredicted RBP10.4□□□□□ -0.74
CDCA3-208ENST00000540683 NT5MQ9NPB1 228 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 TRNAU1APQ9NX07 287 aaKnown RBP10.4□□□□□ -0.74
CDCA3-208ENST00000540683 GULP1Q9UBP9 304 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 RAXQ9Y2V3 346 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 COQ6Q9Y2Z9 468 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 TTLL3Q9Y4R7 772 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 OR1A2Q9Y585 309 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 PCDHGC4Q9Y5F7 938 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 PCDHGA8Q9Y5G5 932 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 RAI2Q9Y5P3 530 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 URB1O60287 2271 aaKnown RBP10.4□□□□□ -0.75
CDCA3-208ENST00000540683 APC2O95996 2303 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 CFAP47Q6ZTR5 3102 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 LRRD1A4D1F6 860 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 GOLGA6CA6NDK9 693 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 GOLGA6BA6NDN3 693 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 APOL1O14791 398 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 MUSKO15146 869 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 NUDT21O43809 227 aaKnown RBP10.39□□□□□ -0.75
CDCA3-208ENST00000540683 USP12O75317 370 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 GOLGA6DP0CG33 693 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 SLC2A4P14672 509 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 GLB1P16278 677 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 EIF2S3P41091 472 aaKnown RBP10.39□□□□□ -0.75
CDCA3-208ENST00000540683 CETN2P41208 172 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 RGRP47804 291 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 GABREP78334 506 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 RALGDSQ12967 914 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 LRP8Q14114 963 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 MESDQ14696 234 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 TCEAL1Q15170 157 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 SLC14A2Q15849 920 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 ALG11Q2TAA5 492 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 NCBP2-AS2Q69YL0 99 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 RAET1GQ6H3X3 334 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 ARHGAP36Q6ZRI8 547 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 CCDC170Q8IYT3 715 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 RBFAQ8N0V3 343 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 FAM46DQ8NEK8 389 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 PCDH19Q8TAB3 1148 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 TSACCQ96A04 125 aaPredicted RBP10.39□□□□□ -0.75
CDCA3-208ENST00000540683 VOPP1Q96AW1 172 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 LRRC45Q96CN5 670 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 FAF2Q96CS3 445 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 DTD2Q96FN9 168 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 COQ10AQ96MF6 247 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 GFM1Q96RP9 751 aaKnown RBP10.39□□□□□ -0.75
CDCA3-208ENST00000540683 TEX101Q9BY14 249 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 STN1Q9H668 368 aaKnown RBP10.39□□□□□ -0.75
CDCA3-208ENST00000540683 RMI1Q9H9A7 625 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 RBM22Q9NW64 420 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDCA3-208ENST00000540683 GOLGA6AQ9NYA3 693 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 PKD2L2Q9NZM6 624 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 KLF15Q9UIH9 416 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 MYLKQ15746 1914 aa10.39□□□□□ -0.75
CDCA3-208ENST00000540683 SHROOM3Q8TF72 1996 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 CCDC187A0A096LP49 1063 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 A0A0J9YYE9 177 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 PRSS38A1L453 326 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 GPR89AB7ZAQ6 455 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 TAF4O00268 1085 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 PSTPIP1O43586 416 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 SPOPO43791 374 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 MFSD11O43934 449 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 BRINP1O60477 761 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 GCATO75600 419 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 PEX11BO96011 259 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 TRBC1P01850 177 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 IVLP07476 585 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 GPR89BP0CG08 455 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 KDELR1P24390 212 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 IL4RP24394 825 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms